Salvia splendens (scarlet sage): 121794402
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Entry
121794402 CDS
T07627
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121794402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121794402
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121794402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
121794402
NCBI-ProteinID:
XP_042048482
LinkDB
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Position
3:3287557..3290841
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AA seq
397 aa
AA seq
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MDSFTDEAKLFIGGIAWDTTEERLRDHFSHYGEVAHAVVMRDRVTSQPRGFGFVVFSDPS
IIPSVLQQTHNIDGRTVEAKRAMSREQQQTMKTGSNSSGGNFVGSDNLKSKKIFVGGLPS
TLTEDEFRGYFQDFGSVTDVVIMNDSNTGRPRGFGFISFTTEDSVDRVLQKTFHELKGKL
VEVKRALPKDAVTGAGSRGNSRGYGSHFSSNESYNSPLPSSRMLQQTQPTNGGYQPNQPT
SGGYQQGQPTSIGYPPYSVYGGASYGYAGNSNPGYGAYGGYDVGGHGSANAGYSGPAGVY
GNLGSPNTDFLKNQWSSQQAGYGASGYGQTGNYGASVPWSNASRSGASGYAQAGRPPSGA
SQYVNKGYNFNGYGDDASHAYGGGNAMHPDASWKPEN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggactctttcaccgacgaggcgaagctcttcatcggtggcatagcctgggacacgacg
gaggagcgcctccgagaccatttcagccactacggcgaggttgctcatgccgtcgtcatg
cgcgacagagtcacctctcagccccgcggcttcggcttcgtcgtcttctccgatccctcc
attatcccttctgtcctccagcaaacgcacaacatcgacggccgtactgttgaagctaag
agagcaatgtcaagagaacaacagcagactatgaaaaccggaagcaatagttctggagga
aattttgtagggtctgataatcttaaaagcaagaagatatttgtaggagggttgccttct
accttaactgaagatgagttcaggggatattttcaagattttggtagtgtaactgatgta
gtgatcatgaatgattcaaatactggccgaccacgtgggtttggtttcatcagctttacc
acagaagattctgttgatagagttctccaaaagacatttcatgagctgaaaggaaagctt
gttgaggtaaaaagagcacttcccaaagatgcagtcacaggtgctggttctcgtggaaat
tccagaggctacggttcacacttttcaagtaatgaatcatacaatagtccacttccaagc
agtagaatgttacagcaaacacaaccaacaaatggtggctatcagccaaatcaaccaaca
agtggtggttatcaacagggacagccaacaagtattggttatccaccttattcagtttac
ggaggtgcaagctatggttatgcaggaaatagcaatcctggctatggtgcttatggtggc
tatgatgtcggtggtcatggaagtgccaatgctggctattctggtccagcaggagtttat
gggaacctaggttcaccaaatactgatttcttgaaaaatcaatggagtagccaacaagct
ggttatggtgcctctggatatggtcaaactggtaactatggggcttctgttccttggagc
aatgcatcaagaagtggtgccagtggttatgcacaggcaggaagacctccgagtggtgct
tctcaatatgttaataaagggtataactttaatgggtatggggacgatgcatctcatgcc
tatggtggtgggaatgcaatgcatcccgatgctagttggaaaccagaaaattga
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