Salvia splendens (scarlet sage): 121794447
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Entry
121794447 CDS
T07627
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121794447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121794447
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121794447
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
121794447
NCBI-ProteinID:
XP_042048543
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Position
3:complement(4076958..4081367)
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AA seq
582 aa
AA seq
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MAYSFPEEVLEHVFSFLRSDRDRNAVSLVCWSWYEIERWCRRRVFIGNCYAVSPEIVIRR
FPKVRAVEMKGKPHFADFNLVPEGWGGYVQPWIRAMAASYPSLEEIRLKRMVVTDESLDL
IARSFKHFKVLVLSSCEGFTTDGLASIAANCRNLREIDLRESEVEDLSGHWLSHFPHNCT
SLVSLNMSCLGSEVNFPALERLVGRCPNLRTLQLNRAVPLEKLPNLLHRAPQLVEFGTGA
YSAEIRPDIYSNVAEAFSVCKQLRGLSGFWDVVPAYLPAMYSACAGITSLDLIYAAIQSP
DLVKIISLCPHLQCLWVLDYIEDAGLEALAASCKDLQELRVFPSDPFEAEDNVALTEQGL
VSVSEGCPKLQSVLYFCRQMSNAALITIARNRPEMVRFRLCIIEPQAPDYLTLEPLDTGF
GAIVENCKELRRLSMSGLLTDRVFEYIGKHAKKLEMLSIAFAGDSDMGLHHVLSGCDSLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLAQKMPRLNVEVIDERGHP
NSRPENCPVEKLYIYRTVAGRRVDMPDFIWTMDKNAGSPEVL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgtttccagaggaggtcctcgagcatgttttctctttcctaaggtccgac
cgtgaccggaacgcggtgtcgctggtttgctggtcttggtacgagatcgagaggtggtgt
cgccgccgcgtcttcatcgggaactgctacgcggtgtcgccggagatagtgattcggcgg
ttcccgaaggtgcgggcggtggagatgaaggggaagccacatttcgcggatttcaacctc
gtgccggagggctggggcggctatgtgcagccgtggattagggcgatggcggcttcctac
ccctcgctcgaagagatcaggctcaagcggatggtcgtcacggacgagagcctcgacctg
atcgccagatcgtttaaacatttcaaggttttggtgctctcttcctgtgagggcttcact
actgacggcctcgcttcgattgctgctaattgcaggaaccttagagagatagatttgagg
gagagtgaagtggaggacctaagtgggcattggcttagccatttcccccacaactgcact
tcactggtgtcacttaacatgtcttgtttaggctctgaggttaatttccctgccttggag
cgtctggttggccggtgccctaatttgaggactcttcagctaaatcgcgctgtaccactt
gagaagctgcccaacctgcttcaccgggccccccaattggttgaatttggaaccggggcc
tactcagctgaaatccgacctgatatatactcaaacgtggctgaagcattttcagtctgt
aagcaactcagaggcttgtctgggttttgggatgttgttccagcttatcttcctgctatg
tattcagcctgtgccggaattacttctctggacttgatttatgcagcgattcaaagtcct
gatcttgtaaaaattattagcctatgtccgcatttacagtgtctctgggttctggattac
attgaagatgctggtctggaagccctggctgcatcttgcaaggatttgcaagaacttcgg
gtgttcccttctgatccttttgaggcagaagataacgttgctttgacagaacaggggctt
gtctccgtttcagaaggctgccccaagctccagtctgttctatacttttgtcgtcaaatg
tcaaatgctgccttgattacaattgcaaggaaccggccagagatggtccgctttcgactt
tgtatcattgagcctcaagctcctgactacctgacactcgaaccacttgatactggtttt
ggagccatagtagagaactgcaaggaattacgacgcctttccatgtccggcctccttact
gatcgagtttttgaatatattggaaagcatgctaagaaattggagatgctgtccatagct
tttgctggggatagtgacatgggcctccatcatgttttgtctggatgcgatagcctgcgg
aaactggagatcagggactgtccatttggggacaaagctctcttagcaaatgctgcaaag
ctagagacaatgcgatccctttggatgtcatcatgcttggtgagctatggagcgtgtaag
ctgcttgctcaaaagatgcccaggctcaatgttgaagttatagatgagagaggtcaccct
aattcccggccagaaaattgccctgttgagaaactctacatctaccggacagttgcagga
aggagagttgacatgcccgatttcatctggacgatggacaaaaacgcagggagcccagag
gttttgtga
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