Salvia splendens (scarlet sage): 121794540
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Entry
121794540 CDS
T07627
Name
(RefSeq) retinoblastoma-related protein-like isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121794540
Transcription factors [BR:
sspl03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
121794540
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
121794540
NCBI-ProteinID:
XP_042048675
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All DBs
Position
3:5514749..5523145
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AA seq
1012 aa
AA seq
DB search
MAEQIKISTPDREREKGGTSIEARFASFCKNFLPLDDSDFLDQATKLFGQSKSLLLANVS
AIGNGTLDEAERYWFAFVLYSVRRLRENVGPMEKGLNLCQILRAARLNIVDFYKELHQFL
IKVGSILSNLYGEDWEKRFEAKESHTNFVHLILLSKKYERAFRDLFSIVDSTDGKQFNVA
NISGHGSEYYRFGWYLFLALRVHVFHMCKDLVSCTHGLVSVLAILLIHVPARYRNFNLND
SERIVMKGDKVDLLASLCNMYDTSEDVLRQTLEKANNMITDILKQSPCLASDSTPENLEN
IVTGGLIYYEDLMDESSLPSSMNLLEKDYDSAIRDMDGLDERIFINDNDSLLGSGCLSGS
AVSMIGNGTKRKTDTLSSPIKTISSPLSPYRSPVRHSNGSAGGGMSKMAATPVSTAMTTA
KWLRSVIAPLPSKPSAELERFLQSCDRDVSADVTRRAQIILEAIFPSSGPGQNATLMDNI
WAEQRRIEAMKLYFRVLQAMCMAESRILHANNLTSLLTNVRFHRCMLACSAELVLATHKT
VTMLFPTVLERTGITAFDLSKVIESFIRHEETLPRELRRHLNSLEERLLESMVWEKGSSM
YNSLIVAKPALSAEVTRLGLLAEPMLSLDAIAMHINMSTGVSAFTQKHEKTGQNGDILSP
KRVCTEYRSVLVERNPFTSPVKDRLLVLNNLKSKFQAPILHSAFASPTRPNPGGGGETCA
ETAVNVFFSKIVKLAAVRINGMVERLQLSQQIRESVYCLFQKILGQRTTLFFSRHFDQII
LCCFYGVAKISQLNLTFKEIIFNYRKQPQCKPQVFRSVYVDWKVPRQTGKTGPDHVDIIT
FYNEIFIPVVKPLLVELAPGGSEQGSSHASEAKNNIDGACPAPAASPKPSPFPSLPDMSP
KKVSAAHNVYVSPLQSSKMDALISHSSKSYYACVGESTHAYQSPSKDLNAINDRLNGTRK
LRVALKFNEEEGALMRGTGTGLVTDSAVADSLGIQNGKCASTPVKPEQQPEL
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcagatcaagatttcaacccctgatcgtgagcgagaaaaaggtggaacgtcc
attgaagcgcgatttgcgagcttctgcaagaattttctacccttagatgacagcgacttt
ttggatcaagcgaccaagctgtttggtcaaagcaagagtcttctgttagccaatgtatct
gctattggaaatgggacgctggatgaagcagaacgttattggtttgcatttgtcctatat
tcagttagaaggcttagagaaaatgttggccccatggagaagggtctcaatttatgccag
atattgagagcagcaaggctcaacatcgttgatttttataaagaacttcatcaatttcta
atcaaggttggatcgattttgagtaatctgtatggtgaggattgggagaagaggtttgag
gcaaaggaatcacacacaaactttgtgcatctgatcctcttgagcaagaaatatgagcgt
gcatttcgggatcttttctctatcgttgattctactgatggcaagcaatttaatgttgca
aatatttctggtcatgggtcagagtattaccgtttcggatggtatctctttttggccctt
cgtgtacacgtgttccatatgtgcaaagatttagtatcatgtactcatggcctggtttct
gtcctggcaatacttttaatacacgttcctgctcgctacagaaacttcaatcttaatgat
tctgaacgcatagttatgaaaggcgacaaggttgatctccttgcatcactttgcaatatg
tatgacacttcagaagatgttctcaggcaaactttggaaaaagctaacaacatgataact
gatatattgaagcaaagcccttgcttggcttctgattctacgcctgagaacttggaaaat
attgttacaggtggtttgatctattatgaagatttgatggatgaatcttctttaccatca
agtatgaacttgctggagaaggattatgattctgcaattcgagatatggatggattagat
gaaaggatttttataaatgacaatgatagcttgctaggttcagggtgcttatctggaagt
gctgtaagcatgattggaaatgggacaaagaggaaaactgacacattgtcctccccaata
aagacaatttcaagtccactgtccccttatcgatctcctgtacgccattccaatggttct
gctggtggtggcatgtccaagatggctgctactccagtcagcacagcaatgacaactgca
aaatggctacgttctgttatcgctccactcccatctaaaccttcggcagagctagagaga
ttccttcaatcatgcgacagagatgtgagtgctgatgtcactaggagggctcagataata
cttgaagccatatttccaagtagcggacctgggcaaaatgctaccttgatggacaacata
tgggctgaacaacgtcgaattgaagcaatgaagctgtatttcagggttctccaagcaatg
tgcatggctgagtcccggattttgcacgcgaacaatttaacttctttgcttaccaatgtg
agatttcacagatgtatgctagcatgttctgctgagcttgttcttgccacacataaaacc
gtgacaatgttgtttccaacagttttggagagaacaggaataacagcctttgatcttagt
aaggtgatagagagcttcatcagacatgaggaaactctgcccagggaactcaggaggcat
ttaaattcgcttgaagaacgattattagagagcatggtttgggaaaaaggctcatcaatg
tacaactccttgattgtagcaaaacccgccctttctgcagaagtaactcgtcttggcttg
ctagccgaacctatgctttctttggatgcaattgccatgcacattaacatgtcaactggt
gtctcagccttcactcaaaagcatgaaaaaactggtcaaaatggagatatactttcacca
aaaagagtctgcactgagtaccggagtgtattggttgaacggaacccattcacgtcgcca
gtgaaagatcgcctcttggtcctaaacaacttgaaatctaagtttcaagctcctatttta
cattctgcatttgctagtcctacgagaccaaatccaggtggtggaggagaaacatgtgca
gaaacagctgtcaatgttttcttcagtaagattgtgaagttagcagccgtcagaattaat
gggatggttgaaagactacagctttcacagcagataagagagtctgtctactgccttttc
caaaagatccttggtcagcggacaacactgttcttcagccgacactttgatcaaattatc
ctttgctgcttctatggagtcgctaagatttcccaactgaacctgaccttcaaagaaatc
atttttaactatagaaagcaacctcaatgcaaacctcaggttttccggagtgtgtatgtt
gattggaaagttcctcgccaaactgggaaaaccggccctgatcatgttgatatcataaca
ttttacaatgagatattcattcctgtggtaaaacctcttctagttgagcttgctcctggt
ggatcagaacagggtagttctcatgcttcagaggccaagaataacattgatggtgcttgt
ccagcaccagcagcatcgcctaaaccatccccatttccaagtcttccagacatgtcccct
aagaaagtgtccgcggctcacaatgtttacgtctccccgttgcagtcatcaaagatggat
gcactaatatcacatagctcaaaaagctattatgcttgcgtgggagaaagcactcacgcg
taccagagcccttcaaaagacctgaatgccatcaacgatcgcttgaatggaaccaggaag
ttgagagttgccctcaagttcaacgaggaggagggcgcgttgatgagagggacagggacg
gggttggtgacggactcagcggttgccgacagcctgggcatccaaaatgggaagtgtgcg
tcgacaccggtgaaacctgagcagcagccggagttgtaa
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