Salvia splendens (scarlet sage): 121794639
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Entry
121794639 CDS
T07627
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121794639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121794639
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
SR proteins
121794639
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121794639
NCBI-ProteinID:
XP_042048826
LinkDB
All DBs
Position
3:complement(6982218..6987098)
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AA seq
269 aa
AA seq
DB search
MSGRFSRTIYVGNLPADIRESEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENARDAED
AKRGRDGYNFDGCRLRVELAHGGRGPSSSSDRGGYSERGGGGGGGSGSSGSRFGMSRHSD
YRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGLVDYTNYDDMKYGMRKLDD
SEFRNPWTRTYIRVKEYKGSPSRSQSGSRSRSRSRSRSPMRRSRSPERSTSRSPPVSPVK
PPRPISSSRSRSRSKSRSASPLPARSGSS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccgtttctctcgaactatctatgttggaaaccttcctgctgatatcagggaa
tcagaagtagaagatttattttacaagtatggccgtatcttggatattgaactgaagatt
ccacctcgtcctccttgctattgttttgtggagtttgagaatgctcgggatgcggaagat
gcaaagaggggcagagatggctataactttgacggctgtcgtttgagggttgaacttgct
catggtggtagaggaccatcatcctccagtgatcgtggtggttatagtgaaaggggcggt
ggtgggggaggcggaagtggcagcagtggtagcagatttggtatgtcccgccattctgat
tatagagtgattgtccgtgggcttccttcttccgcttcttggcaagatttaaaggatcat
atgcggaaagctggtgatgtgtgttttgctgaagtttctcgtgatagtgaaggaacatat
ggcctagttgattatacaaattatgatgacatgaaatatggtatgcgtaagcttgatgat
agtgagtttagaaatccttggaccagaacttatatccgggtaaaggaatataagggcagc
ccatccagaagccaaagtgggagtcgcagcagaagtagaagccgaagcagaagcccgatg
aggagaagcaggtcaccagagcgatcaacttcaagatcacccccagtgtcgcctgttaaa
ccaccccgtcccatatcgagctctcgatcaagatcaaggtccaaatcgaggtctgcatcc
ccactcccggcgaggtccggcagttcctga
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