Salvia splendens (scarlet sage): 121794702
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Entry
121794702 CDS
T07627
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121794702
03036 Chromosome and associated proteins [BR:
sspl03036
]
121794702
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121794702
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Helicases
121794702
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121794702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121794702
NCBI-ProteinID:
XP_042048919
LinkDB
All DBs
Position
3:complement(8059481..8064233)
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AA seq
700 aa
AA seq
DB search
MPSVVMANAEAQFADEKKIMKKSQLAEAMEEKSAEKKTKKEKKSKLTSETARDDSNSKSP
VKIKKEKKRKALEIDNEEEKSDTTSEMGEPTKKKKKKMKFEDGHGEEEDGDDDEKENPNS
VSNFRISAPLRETLKAKGIEALFPIQAMTFDTILDGSDMIGRARTGQGKTLAFVLPILES
LTNGRVKALRKTGYGKAPSVLVLLPTRELATQVAADFEVYGGALGLTCCCLYGGSPYPPQ
QNQLKRGVDIIVGTPGRIKDHIERGNIDFRSLQFRVLDEADEMLRMGFVDDVELILGKVE
DSSKVQTLLFSATLPVWVKQISTKFLKPDKKTADLVGNEKMKASTNVRHFVLPCSVSARA
QLIPDIIRCYSSGGRTIIFTETKDSASTLAGVLPGARALHGDIQQSTREVTLNAFRSGKF
STLVATNVAARGLDIDDVQLIIQCEPPRDVEAYIHRSGRTGRAGKSGVAVMLYDPRMSNF
SRIERESGVKFERISAPQPSDIAKSAGVEAAEKINEISDSVIPVFKAAAEDLLNLSDLTP
ADLLAKALANAAGYTEIKNRSLLTSLENHVTVLLECGKPIYSPSFAYGALRRFLPEEKVE
SIKGLSLTADGKGAVFDVAVEDLDAFLAGQENAAGVSLEVVTLLPNLQEREPSRGRFGGG
GGGRGGFGDRRGTRFGGGRGGGGRGSFSRGRGGGNRNSRW
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgttgttatggctaatgctgaggctcaattcgccgacgagaagaagatcatg
aagaagtcccagctcgcggaggcgatggaggagaaatcagctgagaaaaagacgaaaaag
gagaaaaagtccaaattgacctcggaaactgcccgcgatgattctaattccaagagccct
gtcaaaattaagaaagaaaagaaacgcaaggctttggaaatcgataatgaggaggagaaa
agcgacaccacctccgagatgggtgagcctaccaagaagaagaagaagaagatgaaattt
gaggatggacatggagaggaggaggacggcgacgacgacgaaaaagagaaccccaactct
gtctccaatttccgaatttcggcgccgcttagggagactttgaaggccaagggaattgag
gcgctgttccctattcaggcaatgacatttgataccattctcgatggttccgatatgatt
ggaagggctcgcactggtcagggtaagactttggcatttgtattacctatattggaatca
ttgacaaatggacgtgttaaagctttgaggaagactggatatgggaaggcgccaagtgtt
cttgttctcttacccacaagggagttggccacacaggtggctgctgactttgaagtttat
ggtggagctctagggttgacttgttgttgcctgtatgggggctctccttatccgccacag
cagaatcaattgaaaagaggcgtggacattattgttggaacccctggccgtattaaggat
cacatagagcgaggaaatattgacttccggtccttacagttccgagtgcttgatgaggct
gatgaaatgctgagaatgggttttgttgacgacgttgaacttattcttggcaaggttgag
gattctagcaaagtccaaacgctgcttttcagtgctacattgccagtttgggttaagcaa
atatctaccaaatttttgaaaccagacaagaaaactgctgaccttgttggtaatgagaaa
atgaaagccagcaccaatgtaaggcattttgtccttccctgctctgtatctgccagagct
cagctcattcctgacatcattcgttgctatagcagtggaggacgcactattatcttcaca
gagacgaaggattctgcttccacacttgctggtgtgcttcctggagcacgtgcattgcac
ggtgatatacaacagtctacccgtgaggtaactcttaatgccttcagatcagggaaattt
tctacacttgtggctacaaatgttgcagcacggggactagacattgatgatgtccagtta
attattcagtgtgagccacctcgtgatgtagaggcatacattcatcgatctgggagaaca
ggaagagctgggaaaagtggtgttgctgtgatgctttatgatccaaggatgtcaaatttt
tctaggatcgaaagagaatcaggtgttaaatttgaacgtataagtgctccgcagccatct
gatatagctaaatctgctggtgttgaagcagcagaaaaaatcaatgaaatttctgatagt
gtgattccggtattcaaagctgcagctgaagatttactcaacttgtctgatttaactcca
gcagacctacttgctaaggcattggccaatgctgctggttacactgaaattaagaatcgg
tcacttctcacttcattggaaaatcatgttactgtactgctcgagtgtggaaagcccatc
tactcaccatcgtttgcttatggagctctgaggaggtttttgcctgaggagaaggttgaa
tctataaagggtctttcattaactgcagatgggaaaggtgctgtatttgacgttgctgtc
gaagatcttgatgctttccttgcagggcaagagaatgctgctggtgtgagcttggaagtg
gtgacgttgttgccaaatttgcaggaaagagagccatcaagaggaagatttggtggtggc
ggtggtggccgtggtggcttcggggataggagaggtaccagatttggtggtggaagagga
gggggtggtagaggatccttttctagaggtcgtggtggtggcaataggaacagcagatgg
taa
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