Salvia splendens (scarlet sage): 121794740
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Entry
121794740 CDS
T07627
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121794740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121794740
Spliceosome [BR:
sspl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121794740
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
CGI-121
Motif
Other DBs
NCBI-GeneID:
121794740
NCBI-ProteinID:
XP_042048993
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All DBs
Position
3:complement(8769927..8776671)
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AA seq
485 aa
AA seq
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MTLFWLILMNCLIMKMIFCLIVLLIKEADNDDAEHMEEDVDGDLADIEALNYDDLDSVSK
LQKTQRFTDIMQKVEDALENGSENSTHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNF
IRDKYRLKFPELESLVHHPIDYARVVKKIANEMDLTLVDLEGFLPSAIIMVVSVTASTTS
GKPLPEDVLQKTIDACDRALALDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKIIGTA
GGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPSLRMRACRLL
ASKSTLAARVDSTRGDPAGKTGRTLRAEIHKKIEKWQEPPPAKQPKPLPVPDSEPRKKRG
GRRLRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSK
LAAKVAKKFKDRSYGTSGATSGLTSSLAFTPVQGIELSNPQANQFGGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgactcttttctggctgatcttgatgaattgtctgataatgaagatgatcttctgtttg
atagtacttttgattaaggaagcagataacgacgatgctgagcacatggaagaagatgta
gatggtgatttagctgatatagaagcacttaactatgatgatcttgatagtgtgtcgaag
ctacaaaaaactcagcgatttactgacatcatgcagaaagttgaagatgcattggaaaat
gggtctgagaactccactcatggaattgttttagaagatgatccagagtatcagttgata
gttgattgtaatgccttgtctgtcgatattgaaaatgagattgtgataattcacaatttc
atccgtgacaagtatcgcttgaaatttccagaacttgaatctcttgttcaccacccaatt
gattatgcccgggttgttaaaaagattgctaatgaaatggatctgacgcttgttgatctt
gaaggatttttaccgtctgctattattatggtggtttctgtcacagcatcaactactagt
ggaaagcctcttccggaggatgtcttgcaaaagacaattgatgcttgtgatcgcgcactt
gctctagattctgcaaagaaaaaggttcttgattttgtggagagtcgaatggggtatatt
gccccaaatctctcagccatagttggaagtgctgttgcggcaaaaataattggtacagct
ggtggtctttcggcattagcaaaaatgcctgcatgcaacgttcagcttcttggtgccaaa
aagaagaatttagcagggttttcaacagcaacatcccaatttcgtgttggctatttggag
caaactgagattttccagagtactccgccttccttaagaatgcgtgcttgtcgacttttg
gcttcaaaatccactcttgctgcacgtgtagactctactaggggagacccagctggaaaa
actgggagaactttgcgcgcagagattcacaaaaagatagagaagtggcaagagccgcct
cctgctaagcagcctaaaccacttccggttcctgattcagagcccagaaagaagagagga
ggtcggcgtttaaggaagatgaaagaaagatatgctattacagacatgcggaagctggct
aacaggatgcagttcgggataccagaggagagttcactaggtgatggacttggcgaaggt
tatggaatgctcggtcaggctggtagcggaaagcttcgtgtatctgttggacagagcaaa
cttgctgctaaagtagccaagaagtttaaggacaggagttatggaaccagtggcgcaact
tctggactgacatcaagtctggctttcacacccgtccagggaatcgagctttcaaatcct
caggcgaaccagtttggaggaactcagagtacttatttttcagagactggaactttttcg
aagatcaagagaacataa
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