Salvia splendens (scarlet sage): 121794805
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Entry
121794805 CDS
T07627
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121794805
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121794805
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
121794805
NCBI-ProteinID:
XP_042049085
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All DBs
Position
3:9613532..9615291
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AA seq
441 aa
AA seq
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MASIYSIKMSILLLSLLYLVALLPKSNAKIAEMDDYLRKKAEQSHVEYIKAYVPNPEAVA
EEISKEVGETMVHHIAKRRHLLEDGNKATNPIDRCWRGDRNWDQNRKRLVDCVLGFGRHT
TGGKAGDFYVVTDSSDDDVDNPRPGTLRHAVIQMEPLWIIFERDMLISLKQELIFASDKT
IDGRGAKVRIAYGAGFTIQFVHNVIIHNIRMHNIVPAFGGLIRDAVDHIGLRTISDGDAI
SIYGSNNIWIDHVSLSKATDGLIDAIEGSTAITISNCKFNNHNAVMLLGAHDSTTEDKLM
QTTIAFNRFGEGLVQRMPRCRWGLFHIINNYYSHWQMYAIGGSANPTIISQGNRYKASDD
SNTKQVTKREYSSEEWQNWQWQSEGDVFVNGAYFKASGPKIKHNHWSVATKRHMMKFRPG
SYAGRLSRYAGVLKCVAGKLC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatttatagcatcaagatgtcaattctcctcctctctctgttatatttagtt
gcattgctgcctaaatccaacgcaaaaattgcagaaatggatgattatctcagaaaaaag
gctgagcaatcccatgttgaatatatcaaggcttatgttcccaaccctgaggctgttgct
gaagaaatcagtaaagaagttggcgagacaatggtgcaccatatcgccaagaggaggcac
ctcctggaagatggcaacaaggctacaaaccccatcgaccgttgctggcgcggcgaccgc
aactgggaccagaaccggaagaggcttgtggactgcgtcctcggcttcggccgccacacc
acgggaggaaaggctggggatttctacgtcgttaccgacagctccgacgacgacgtggac
aaccctaggccgggcaccctccggcacgcggtcatccagatggagcccctgtggatcatc
ttcgaacgcgacatgctcatcagcctcaagcaggagctcatcttcgccagcgacaagacc
atcgacggccgtggcgccaaagtccgcatcgcgtacggggccggcttcacgatccagttc
gtccacaatgtgatcatccacaacatccggatgcacaacatcgtcccagccttcggaggt
ctgatcagggacgctgtcgaccacatcggcctccgcaccataagcgacggcgacgccatc
tccatctacggctccaacaacatctggatcgaccacgtctccctctccaaagccaccgac
ggcctcatcgacgccatcgagggatccactgccatcaccatctccaactgcaaattcaac
aaccataatgctgtgatgcttcttggagcacatgatagtactactgaagacaaactgatg
caaacaacaattgcattcaaccgttttggtgaaggtttggtgcagagaatgccgaggtgc
agatggggtctattccacatcatcaacaactactattcccactggcaaatgtatgccatc
ggtggcagcgcaaaccccactattatcagccagggcaatcgatacaaggcttcagacgac
tccaacaccaagcaggtgaccaagagggagtactcttctgaggagtggcagaattggcaa
tggcaatccgaaggggacgtgtttgtcaacggagcctacttcaaagcttctggtccgaag
atcaaacacaaccattggagtgttgctacaaagaggcacatgatgaagttcaggccaggc
tcatatgcaggcaggctatcgcgatatgcaggtgtcctcaagtgcgttgcagggaaactg
tgttga
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