Salvia splendens (scarlet sage): 121795012
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Entry
121795012 CDS
T07627
Name
(RefSeq) nuclear pore complex protein NUP96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121795012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121795012
03036 Chromosome and associated proteins [BR:
sspl03036
]
121795012
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121795012
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121795012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
WSN
Motif
Other DBs
NCBI-GeneID:
121795012
NCBI-ProteinID:
XP_042049369
LinkDB
All DBs
Position
3:complement(12666568..12672482)
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AA seq
1045 aa
AA seq
DB search
MEVNLAVLKPTSIHESQYKRRRVSLNGVDTSLSCQVLHDAENSLPTLRCSDYYTKPCLSE
LAIRELSNPGYCSRVEDFVIGRIGCGCVKFIGETDVRRLDLDSIVKFRNCEIVIYEDDSS
KPLVGHGLNKPAEVTLLLQTKPLSNLNEAQLAKIVEKLKCKTESQGAQFISFNPDNCEWK
FLVQHFSRFGLVEEDEDEDDVPMDDVSPGAQDPEGMNGNEVSDDEDNASPDMSLLSHSLP
AHLGLDPVRMQDMRMLWFPAKEDEVEALTSKHPYDNPPFAKDSSRSPLHHSSRKTVHNSN
TPSIRKTPLALKEFNPGGFSSASSGAILLSQQNKGLHLTTRKSEGFELELTKKTPVTGSY
SCNIVDAALFMGRSFRVGWGPNGILVHSGMPVGSDNSRAVLSSVINIEKVALDKVTRNDS
NKVKEELADFCFSSPLNIHKELSRETKKVELGTYNLKLQKLICDRLTLPDICRSYIDIIE
KQLEVPSLSSDTRVLLMHQVLVWELIKVLFSTRKMGGQLKLIEEEEEDMISDARESYPDV
DQEALPLIRRAAFSYWLQESVHHRVQEDISSLNELSGLEHIFLLLSGRQMDAAVELAASR
GDVRLSCLLSQAGGSTTNRADIAHQLDLWRKNGLDFSFIEDDRVRLLELLAGNIHRALHG
VKIDWKRFLGLLMWYKLPPDISLPVVFNTYQKLLNEGDAPYPVPVYIDEGPIEDVSKWVL
NNRFDLAYYLMLLHAREENDFGALKTMFSASASTYDPLDYHMIWHQRAVLEAIGTFSSND
LHVLDMAYVSQLLCLGQCHWAIYVVLHMPHREDYPYLQATVIREILFQYCEVWSTSDSQW
EFIESLGIPLAWLHEALAIFHSYTGDLPKALGHFLACASWQKAHSIFLTSVAPSLFLSAK
HTEIWELATSMEDYKSEIEDWDLGAGIYISFYILKNSMQEDNSTMTELDTLKNKNDACAD
FISRLNKSLAVRGNRLSVEARVVFSKMAEEISSLLLSDSNEGSTGEDQLICFETVFRAPM
PEDLRSYHLQDAVSLFTCHLSELAQ
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggaagttaatttagctgtgctaaagcctacttcgattcatgagtctcagtacaaaaga
agaagagtttctttgaatggtgtagatacttctctttcctgtcaggtcttacatgatgct
gaaaattctttaccaaccctccgttgttctgattactacacaaaaccgtgcttaagtgag
ttggctattcgtgagctctcaaaccctggttattgtagtagagttgaagattttgtcatt
ggaaggattggctgtggatgtgttaagtttatcggggaaacagatgttagacgcttggat
ttggactccattgtcaaattcagaaactgcgagattgttatatatgaagatgacagttct
aagccgttggttgggcatggtcttaacaagccagctgaagtaactctactacttcaaaca
aaaccattgagtaatctaaatgaggcgcagttagcaaaaattgtggaaaaattgaagtgc
aagacagaaagtcaaggggcacaattcatttcatttaatccagataactgtgaatggaaa
tttttggtacaacattttagcagatttggcctggttgaggaagatgaagatgaagatgat
gttccaatggatgatgtgtcccctggagctcaagatcccgaaggtatgaatggtaatgag
gtatcagatgatgaggacaatgcttcaccagacatgagtcttctttcacattctcttcct
gctcatcttggtcttgatcctgtcaggatgcaagacatgaggatgttgtggtttcctgcc
aaggaagatgaggtagaggctcttactagcaaacatccatatgataatccaccttttgct
aaagattcctcaagatctcctttgcatcattcatctaggaagacagttcacaattcaaat
accccttccattcgcaagactccattagctttaaaagagtttaaccctggtggttttagc
tctgcctcctccggagccattttattgtcccaacaaaataaaggtttgcacctaaccacg
agaaaatctgaaggcttcgagctcgagcttacaaagaaaacaccagtaactggcagttat
tcttgtaatatagttgatgcagcactatttatgggaagatcctttcgagtaggttggggc
ccaaatggcatacttgtgcattctggtatgcctgttggtagtgataattcccgagctgta
ttatcctctgtaataaatattgaaaaggttgcacttgacaaagtgacaagaaatgacagc
aacaaagttaaggaggaacttgctgacttttgtttcagctcccccctcaatattcacaag
gaattgagtcgtgaaacaaaaaaagttgaactaggaacctataatctcaaacttcaaaag
cttatttgcgaccgcttgactcttccagatatttgtaggagttacatagacatcatagag
aagcaactagaggtgccaagcttatcgtctgacactcgcgtcctactgatgcaccaagtg
ttggtttgggaattaattaaagtgctcttttcaacaaggaaaatgggtgggcaattgaag
ctcattgaagaggaggaggaggatatgatttcagatgcaagggaaagttatccagatgtt
gaccaggaagcacttccacttattagacgagctgctttcagctattggctgcaagagagt
gttcaccaccgtgtacaagaagatatcagttcgctaaatgagttgagtggtctagaacac
atatttttgcttctttctggcagacagatggacgctgccgtagagcttgctgcttctaga
ggggatgtacgactatcttgtctcttaagccaggctggtgggtccacaaccaatcgtgct
gatattgctcatcagcttgatctttggaggaagaatggactggattttagttttatcgag
gatgatagggtgaggcttcttgaattgctcgctggcaacattcatcgggccttacatggt
gtaaaaattgactggaaaaggttcctaggactgttgatgtggtataaacttccacccgac
atttcgttacctgttgtttttaacacttaccagaagcttctgaatgagggagatgctcca
taccctgttccagtttacatagatgaaggacctatagaagatgtgagcaaatgggttttg
aataatcgttttgaccttgcttattatcttatgcttcttcacgcccgggaagaaaatgat
tttggtgctttaaagaccatgttcagtgcctccgcttcaacatatgaccctcttgactat
cacatgatttggcatcagcgtgctgttttagaggccattggcactttcagttcaaatgat
ctacatgtccttgacatggcatatgtttctcagttgctctgccttgggcaatgtcattgg
gccatctatgtggtacttcatatgcctcaccgtgaagattatccttatcttcaagctaca
gttataagagaaatcctctttcaatattgtgaagtttggagtactagtgactcacaatgg
gaattcattgaaagtctaggcattcctttagcatggttgcatgaagctttggcaatattt
cacagttacactggggaccttccaaaggctctaggtcactttcttgcatgtgcaagctgg
cagaaagcacactctattttcttaacttcagttgctccgtctttgtttttgtcagcaaag
catacagaaatatgggagctagcaacatccatggaggactacaagtcggagattgaagat
tgggacctcggggcaggaatttatatttcattctatatattgaagaattccatgcaggaa
gacaatagcaccatgactgaactggacactcttaagaacaagaatgatgcatgtgctgac
tttattagccgtttgaacaagtctctggcagttcggggcaacagattatcagtcgaagca
agagtcgtattctcaaagatggcggaagagatctccagtctgcttctttctgatagcaac
gagggttccacaggcgaggatcagctgatctgcttcgaaactgtttttcgggcacccatg
ccggaagacctccgctcatatcatttacaggatgctgtttcacttttcacttgtcatctc
tctgaactggcacaataa
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integrated database retrieval system
