Salvia splendens (scarlet sage): 121795091
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Entry
121795091 CDS
T07627
Name
(RefSeq) coatomer subunit beta'-2-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121795091
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121795091
Membrane trafficking [BR:
sspl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121795091
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121795091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_RFWD3
WD40_like
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
WD_LRWD1
TPR_1
HEAT_GCN1
Clathrin
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
121795091
NCBI-ProteinID:
XP_042049466
LinkDB
All DBs
Position
3:14217098..14228707
Genome browser
AA seq
913 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQIMVKSFEVTELPV
RSAKFIPRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVSYLRGSRRVVIGYDEGTIMVKLG
REVPVASMDNSGKIIWSKHNEIQTVNIKSVGADYDVADGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNKSFGSALEFVWSTEGEYAVRESTSRIKIYTKNFQ
EKKSIRPTFSAERIYGGILLAICSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAI
ASDTSFYILKYNQDIVSAHLDSGRSVDEQGVEDAFELLYEINERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVFLIDKEFNVIGYTLLLSLIEYKTLVM
RGDLERANKVLQSIPKEHQNSVAHFLESRGMIEDALEVATDPDYRFELAIQLGKLDIAKE
IATDAQSEAKWKQLGELAMSRGMLEMAEECLKQANDLSGLLLLYSSLGNAEGISELASLA
KEHGKNNVAFLCLFMSGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLNK
INQKAAESLADPEEYPNMFEDWQVALAVEAKAAETRGNLPPAAEYIHHADRSTASLVEIF
RTMQIEEDEHLENGGLDYEDGKTNGELSQEQDDTQVDGESHEEAVVVDADPTDGAVLVNG
NEAEEELGVKPSA
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcagactagaaatcaagaggaaacttgcgcaaagatcagaaagagtaaagtct
gtggatctacatccaacagagccatggatattggcgagtctgtattcggggactgtttgc
atctggaattatcagacccagataatggttaaatcttttgaggttactgaacttccagtt
agatctgctaagtttataccacgaaagcagtgggtggttgctggtgctgacgacatgttc
attcgtgtctacaattacaatacgatggataaggttaaagtatttgaggcccacacagat
tatatcaggtgtgtggcagttcatcccactctcccctatgtgttgtcatcatcagatgac
atgctcataaagctctgggactgggaaaaggggtgggcatgcacacaaatatttgagggt
cactcccactacgtaatgcaagtgacttttaatcccaaagataccaatacttttgctagt
gcatcactcgatcgcacaattaagatttggaaccttggctcccctgatccaaattttacc
cttgatgctcacctgaaaggagtaaactgtgttgattattttactggtggtgataaacct
tatttaatcactggctctgatgatcacactgctaaggtgtgggattatcagacaaagagc
tgtgtccaaacactagaaggccacacacataatgtttcggccgtttgtttccaccctgaa
cttcccattataataacaggttctgaggatggtacagttcgcatatggcattccaccact
tatagacttgaaaacacattgaattatggacttgaaagagtttgggctgttagttacttg
agaggatcacgacgggttgtaattggctatgatgaaggaaccataatggtaaagcttggt
agagaagtacctgttgcaagcatggacaacagtgggaaaatcatatggtctaagcataat
gagatccagacagtcaacattaagagtgttggggccgattatgatgttgctgacggagag
agattgcctttagctgtgaaggagttgggaacctgtgacctttatccacagagtttgaag
cacaatcctaatggtaggtttgttgttgtatgcggggatggtgagtacatcatatacaca
gcattggcatggagaaacaaatcctttggctcggctttggaatttgtttggtcaacggaa
ggagaatatgctgttagggaaagtacatcaaggattaagatctataccaaaaatttccag
gagaagaaaagcatccgccctacattttcggctgagcgcatctatggcggcatattattg
gcaatatgctcaaatgattttatttgtttctatgattgggctgaatgtaggttgatacgt
cgaattgatgtcaatgttaagaatctttactgggctgatagtggggatttggtggccatt
gccagtgatacgtcattctacatacttaagtataatcaggatattgtttctgcgcatctg
gatagtgggcgatcagtagatgaacaaggggtggaagatgcttttgagcttctttatgaa
attaatgaaagagtacgaactggtctctgggttggggactgttttatctacaataactcg
tcttggaggcttaattactgtgtcggtggagaggtgacaactatgtttcatttagaccgg
cctatgtacctgcttgggtatcttgctaatcagagccgtgtttttctcatcgacaaagaa
tttaatgttattggatatacattgctgctcagcttgattgagtacaagactcttgtgatg
aggggtgatctggagagggcaaataaggtcctgcaatcaattccaaaggagcatcagaac
agtgtcgcccatttcttggaatcacgaggaatgatagaagatgcacttgaagttgctacc
gatcccgactacagatttgagttagccatacagctaggaaagctagacattgcaaaggaa
atagcaacagatgcacaaagtgaggctaaatggaaacaattgggtgaattagccatgtct
agaggaatgttggagatggcagaagagtgtttgaagcaagctaatgacctgagtggttta
ttgctactctattcatccttaggaaatgccgaggggattagtgaacttgcctctcttgca
aaagagcatggtaaaaacaatgttgcattcctttgtctgtttatgtcgggtaaattggag
gactgcctacaattgttggtagagagcaatcggataccagaagctgcattgatggctcgg
tcttaccttccaagtaaggtgtcagaaattgttgctctttggagaaaggacctcaacaag
attaatcaaaaagctgcagaatcacttgctgaccctgaagaatatccaaatatgtttgag
gattggcaagtcgcacttgctgttgaagctaaagctgctgagacaaggggtaatttgcct
ccagcagctgaatacatacaccatgctgatagatcaacagcaagtcttgtagaaatcttc
agaaccatgcaaatcgaagaagatgagcacctagaaaatggtggcttggattatgaggat
ggaaagacaaatggtgaattgtcacaagagcaggatgacacacaagtggatggggagagt
catgaagaggctgttgtggtggatgctgaccctacagatggtgctgtgctcgtcaatgga
aatgaggcagaggaagagttgggagtgaaaccgtcagcctaa
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integrated database retrieval system
