Salvia splendens (scarlet sage): 121795163
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Entry
121795163 CDS
T07627
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121795163
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
90S particles
Other 90S particles
121795163
Pre-60S particles
Other pre-60S particles
121795163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_EF3_N
TOR1L1_N
RIX1
Motif
Other DBs
NCBI-GeneID:
121795163
NCBI-ProteinID:
XP_042049550
LinkDB
All DBs
Position
3:14675364..14683962
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AA seq
1142 aa
AA seq
DB search
MEDDALEAPQSFVAEADICQQLLTRYARSSAAQHRHLCATAAATRSIIQSASMPLTPISY
FAAAITSLSNYENLDADALGAVTSFISIVLPLVGKGEIKPEKAHEAVEVLVTLVEESGGK
LGTSGLRAVVKCVGVLVAEFCNLKEWGSVGLGFEWLLRFSIDKRPKVRKSAQDCLLKVFK
LLEHSSISKKASNSIYSLLKRHMPLASETSNSKIVDGNRHELISRSEHQEVLHLLNIMKH
VIPDLSPKVREKVLSILLKIPSSQSMVAARHVFDVMAAIFETSETKVIISNAEDIFRLLT
SYIALGEKNPAESVLFAANLSKTVLGRLHNGDIDQWESVFPMLVEALAGLLSSPRDNVAL
QASLILRELMDQHIVGKRFLTMESKEKGDDTTQSAEFKSVRVGCTKFYNLLCSSSPILNK
HLLSVVSSLFLKLGKMSDIFMRPILLKLADLMNTTSVSTSEVIHLEDCIGSAVVAMGPEI
LLSLIPISLNTKDFSCSNIWLIPILKKNIVGSSLQFFIEHIIPLAESFEKGSNKVKNPVI
GQDLQAYAHGCWGLLPVFCHWPIDTYQSFPSLSELLIPFLKKDSFMIENIAISLQGLVNE
NRRVLASDNVGSAQLTDVHNSGSVDAAIDYEIRHVYSKKMANKNIKALSLGAKELLLPLV
DVLFECIPETREHLQGAISCLVSICDSSVTKEIFIASLKKLKLLDDAGEHGKLEIIADVT
SKEKESAGGTDVERCLILDLASCIVEGCDADLVNILFSLIKHYLQASDVVSQMEAYQTLS
KILEKHSSFCSTEFDVVMDLLAGMKPSENIELVKSRFACLQTLLIHALSKNPDEENTKAF
LILNEIILMLKDSREEGRKAAYDALHGLSSKLRSSADSSSKELYHKLITMITGYLSGSSP
HIKSGVVSALSVLVYSDPDICVTMPDIFPSVMELLHSKAIEVIKAVLGFVKVLVSSLTQN
DLHHSLSEIMDGILRWSSVSRYHFKEKIIVILEILMRKCGCANVKALAPEKYKDFVQGVV
ENRHGKTRPEPSDKSLKGQEKRKRDESAISSKEEGYTGRPWKKRDNQKNTGNSSQSTGHS
DRTNFRKGESNRPQGGDAKRFTGKSSGGEKKQKGRSAFKSNERNLHAAASRNPKHKKSAR
KN
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacgcccttgaagcaccacagtcattcgttgcggaggctgacatatgccaa
cagcttctaacccgctacgcccgctcctcagctgcgcagcaccgccacctctgcgccacc
gctgccgccacccgctccatcattcagtcagcttctatgccccttaccccgatatcatac
ttcgctgccgcaatcacttctctctccaattatgagaacttagacgccgatgctctcggt
gcggtcacctctttcatatcaatcgtgcttcctttggtcggtaaaggcgaaataaaaccg
gagaaagcgcacgaggccgtggaggtattggtgacattagttgaggagagtggtggtaaa
ttgggaacttctggtctcagggctgttgtgaagtgtgtgggtgttttggttgcggaattc
tgcaatttgaaggagtggggatcggttgggctagggttcgagtggcttttgaggttctcg
attgataagcggcctaaggtaaggaaatctgctcaggattgtctcttgaaagttttcaag
ttgttggagcactcttctatctccaagaaggcgagtaattcaatttactcgttgctcaaa
cgtcacatgccattggcttcagaaactagcaattcaaaaatagttgatggaaacaggcat
gagttaatatcgaggtctgagcaccaagaagttcttcatttactgaacataatgaagcat
gttattccagatctctcacccaaggtccgcgagaaggtgctttcaatattgttgaagatc
ccgagttcccaatccatggtagcggcaaggcacgtcttcgatgtcatggcggctatattt
gaaacttcagaaactaaagttataatctcgaatgctgaagacatctttaggctattgacc
tcttacatagctctgggtgaaaagaacccagctgagagcgtgttgtttgctgcaaatttg
tcaaaaactgttctaggaagacttcataatggtgatatagatcaatgggagtccgttttc
cctatgttggttgaagctttagcaggtctgttatcttcccctagagataatgtggcttta
caggcttccctcattctcagagaactgatggatcagcatattgttggaaaacgcttccta
acaatggaaagcaaagaaaagggggatgatacaactcaaagtgcagagtttaaatcagta
cgagttggatgcaccaaattctacaatttgctgtgttcttcatctccaattctaaataaa
cacttattatctgtagtttcttctctgttccttaaacttggtaagatgtcagatatcttt
atgaggcctatacttcttaaactcgctgatttgatgaatactacttccgttagtacttca
gaagttatacacctcgaagactgcatcggctctgctgttgttgccatgggaccagaaata
ttactctctcttataccaatttccctcaatacaaaagatttttcctgttcaaatatttgg
ctgataccaattttaaagaaaaatattgttggatcatcactacaattctttatagagcac
atcatacctctggctgaatcctttgagaagggatctaataaagttaaaaatccagtaatt
ggccaagatctgcaggcttatgcccatgggtgttggggtttgttgcctgtgttttgccac
tggcctattgatacatatcagagttttccctcactttctgaactcttaatcccctttctc
aagaaggactcatttatgatcgagaatattgccatcagtttgcagggactagtaaatgaa
aatagaagagtgcttgcctctgataatgttgggtctgcacagttgactgatgttcacaat
tcaggaagtgttgacgctgcaatagattatgaaataaggcatgtctactccaaaaagatg
gcgaacaagaatattaaggccttgtctttgggcgccaaagagttgcttctgcctttagtt
gatgtgctatttgagtgcattccagagactcgggaacatctacagggagcaatcagctgc
ttggtatccatatgtgattcttcggtaaccaaagagatatttattgcttcacttaagaag
ttaaagctactggatgatgctggtgaacatggaaaattagaaatcattgctgatgttaca
tccaaagaaaaagagagtgctggtggtactgatgtggagaggtgtttaatactggacctt
gcatcttgcatagttgagggatgtgatgctgatctagttaatatactattttctcttatt
aagcattatctgcaggcaagtgatgtggtcagtcagatggaagcatatcaaactctcagc
aaaattcttgagaaacattcttcattctgctctacagaatttgatgtggtgatggatttg
ttggctggaatgaagccttcagaaaacattgaattggttaaaagccgttttgcctgtttg
cagaccttgctaattcatgcattatcgaaaaacccggatgaggagaatacaaaggcattc
cttatcctgaatgagatcattctcatgttaaaagattccagggaagaaggcagaaaggca
gcttatgatgctttacatggattaagttccaagttgagaagttcagctgattcttcttca
aaagagctctatcacaaacttataactatgattacagggtatctttcaggttcttctcct
catataaagagtggagtggtatctgcactctcggttttagtttatagtgatcccgatatc
tgtgttacaatgcctgatattttcccctcggttatggaattgttacatagcaaagcaatt
gaggttataaaagctgttttaggcttcgtaaaggtgttagtttcatcgcttactcaaaat
gatctgcaccattctctttctgaaatcatggatggaattcttcgttggtcatctgtctcg
cgctatcatttcaaagaaaagataattgtgatcttggagattttgatgaggaagtgtggt
tgtgccaatgtgaaggcccttgcacctgaaaaatacaaggactttgtgcagggtgttgta
gagaatcgtcatggcaagacaaggccggaaccttctgataagtctcttaaggggcaggag
aaaaggaaacgagatgaatctgccatctcgtccaaggaagaaggatacactggacgacct
tggaagaaaagggacaaccaaaagaacactggaaattcctcacagagcactgggcactct
gatcgcaccaatttcagaaaaggcgagtcaaacagacctcaaggtggtgatgcaaaacgc
ttcacggggaagtcctccggtggagagaagaagcagaaagggaggtcagcctttaagagc
aatgaacgcaacctccatgctgctgcttctaggaatccaaaacacaaaaaatcagcaaga
aagaactga
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