Salvia splendens (scarlet sage): 121795321
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Entry
121795321 CDS
T07627
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121795321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121795321
03012 Translation factors [BR:
sspl03012
]
121795321
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
121795321
Translation factors [BR:
sspl03012
]
Eukaryotic type
Release factors
121795321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
She2p
Motif
Other DBs
NCBI-GeneID:
121795321
NCBI-ProteinID:
XP_042049777
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All DBs
Position
3:18127438..18131773
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AA seq
436 aa
AA seq
DB search
MADGQENDKNIEIWKIKKLIKALEAAKGNGTSMISLIIPPGDQIARVTKMLAEEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIITDDGKEKKVTFDFAPFKAIN
ASLYLCDNKFHTEPLSQLLESDEKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPVTSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKFFEEISQDTG
KYVFSVDDTIKALEMGAVETLIVWENLDINRFTLKNSVTNEIVIKYLNKEQEHDQSNFKD
AASSGELEVQEKMPLLEWFANEYRNFGCSLEFVTNRSQEGSQFCRGFGGIGGILRYQLDI
RSFDEPSDEGEFYESD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggccaggaaaatgataagaatatcgaaatatggaaaataaagaaattgatt
aaggctctggaagctgctaaaggaaatggtaccagcatgatatcccttataattccccca
ggtgatcaaatagcccgggtcaccaaaatgcttgcagaagagtatggaacagcttcaaat
attaaaagcagggtgaatcgtcaatcagtgctaggtgcaatcacctctgcgcagcagagg
ctcaagttgtacaacaaagtcccaccgaatggcctcgtgctctatactggaactataata
acagatgatggaaaagagaaaaaggtcaccttcgactttgcaccttttaaggccataaat
gcttctctttacctttgtgacaataaatttcatactgagcccttgtctcaactcctggaa
tctgatgaaaagtttgggtttattgtcatggatggtaatgggaccctttttggaacctta
agtggtaatacaagagaagtgcttcacaagttctcggttgatcttccaaagaaacatgga
agaggaggacaatcagctcttcgttttgctcgtcttcgaatggagaagcgtcacaactat
gtgaggaagactgcagagcttgccactcaattctacattaatcctgttaccagtcagccg
aatgtatcagggttgatacttgctgggtcagctgatttcaagactgagctgagtcagtct
gatatgtttgatcctcgccttcaagccaagatactgaatgtggtagatgtatcctatggt
ggggaaaatggtttcaatcaagccattgaattatctgctgagattttgtccaatgttaag
ttcatacaagaaaaacgcttgattgggaaattctttgaagaaatcagtcaagataccgga
aaatatgtattttctgtggatgatacaataaaagctttggagatgggagctgttgaaaca
ttgatagtgtgggaaaacctggatataaatcgttttacactaaaaaattctgtgaccaat
gagattgtcatcaaatacttgaacaaggagcaagagcatgaccagagcaacttcaaggat
gctgcatcatccggagaattggaggttcaagagaaaatgccattactggagtggtttgct
aatgaatatagaaactttgggtgttcacttgagtttgtgacaaatcgatcccaggaagga
tcacagttctgccgagggtttggtggcattggtggaattcttcgttaccagcttgacatt
cgatcctttgatgagccatccgacgaaggagagttttatgagtcagactaa
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