Salvia splendens (scarlet sage): 121795354
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Entry
121795354 CDS
T07627
Name
(RefSeq) DNA polymerase zeta catalytic subunit-like isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121795354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121795354
Enzymes [BR:
sspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121795354
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
121795354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
DZR_2
Motif
Other DBs
NCBI-GeneID:
121795354
NCBI-ProteinID:
XP_042049813
LinkDB
All DBs
Position
3:complement(18928737..18937645)
Genome browser
AA seq
1960 aa
AA seq
DB search
MGSSQPQLFSVRIVSIDYYMAPPIPDFDISYSHFHGGKVNEVPVIRIYGSTPAGQKTCLH
IHQILPYLYVPISDLGPITNDEADSSMHSVSLSLEKALKLKGNTGSKRQHIHGCNLVRAK
KFYGYHSSEELFVKIYFYHPQDVSRAANLLLVGAVPDTNLQPYESHIPFLLQFLIDYNLY
GMGHLHVSKMKFRHPVPDVYSHQKLKYSSKLRTSRDDTTCMDFQADSGGDLSLATPIWIS
STIPDGWIWQFSNQLSSSAGEVYPMFRRQSTSELEADAVAHDIVNQQFISYVSMSQTPSN
TKMVQSLIPIWEEEHAANGVTKVTLLDPEKPLPRDVLRDLLGGAEFEKFIDVLDDSDNCS
LLTPESVKSSAVCGDFLDPTAANLEESSYLPSNYLKAVEKDGPLISLSSPLQKFVAAETN
ETDAAKQLQLSANVEQSTAKDEDALRLLKWLASSQATEDINSDDELTRETILSPLLPSKD
IDKVLERANVDYESESQKECQDILDSVGMINNEDQDAIPFQSAEYNDPVKHFWSRVIPQV
DGSSDDPPSTPCSGESPKTEYSEAKSNVEAQSWSRIASNLRNKHLNKRPQWGSLPVCCQK
VSDFLPPSVKEDLGTSLTGNDTDKLPCVKVDKKKDICHTGKASVIAECSTRDLMRRKRSC
RVELADHRSPVGVRDTKFSDSDCASRDVYLASRSRSCDENKKALTSRTKSHARNINSSVE
VCSEAIHINPSCSPVLGELHGSSCEDGMDAENLLKNENTECVNHNYSCSGEYLHSTVDSN
MNVDESEHAHVSTTETFGKVLGRTMLLTDIVESCTVPSNSAATEPAYDTDCTSERYPTSV
SIHKLLNFPTENLKGMERETAAMQFEKLPYCGKDPGMDEAYDSSKDQEAETVKLTAMTIL
KKPPTIDWKDEGKTEAPLSLQGRSANDLQPFFERNFLEDEQLPCVSPRKSGLVDNHEAVM
GVPVLYQNDGSYLYMLTPAMSPPSRQSVDRWLLSDCSDISRHRMDSPPQFLPISDGLSGD
LVEERDSQATDSSIQPESAFMSMHDKRPNRTQPPEHNQEIKRKLETSCSLDTSQISGPDK
KMRFTPLSQIGFRDPASAGEGQQLTLLSVEVQAESRGDLRPDPRFDGINAIILVLQEDNA
SMSDTYVLLRCDSANLEKDLDAVSESKTCVCQEESQLLNHFTKLIHDFDPDILMGWDVQS
GSLGFLAERAAHLGIGLLNNISRTPSRINISSADYKASDKEKDSKSVTGEVVHLENSIIE
DEWGRTHASGVHVSGRIVLNVWRLMRNEVKLNMYTVEAVAETVLRRKIPYIPWKVLTKWF
ASGPGRARYRSIDHTSERAKLNLQILNQLDMINRTSELARVFGIDFFSVLSRGSQYRVES
MFLRLAHTQNYLAISPGTQQVASQPAMECIPLVMEPESRFYADPVVVLDFQSLYPSMVIG
YNLCYCTCLGKITPPMTHGLGVCAYSPHLNTLRNLKHELLVAPNGVAYVPSKVRRGILPR
LLEEILSTRIMVKQAMKKLDPSQLVRHRILNARQLALKLIANVTYGYTAAGFSGRMPCAE
LADSIVQCGRRTLETAISFVNSNDKWKAKVIYGDTDSMFVLLKGRSVQEAFAIGREIASA
ITKMNPSPVTLKMEKVYHPCFLLTKKRYVGYSYESPDQSKPIFDAKGIETVRRDTCAAVS
KTMEQSLRIYFESQDIYKVKAYVLRQWTKILSGRVSIQDFVFAKEVRLGTYAEHAYSLPP
AAIVATKLLRKDPRAEPRYAERIPYVVIHGEPGARLMDMVVDPLELLAINSPFRLNDIYY
IRKQIMPALQRVFGLVGADLNQWFLDTPRPVRETAGKRQTVAQNPQRMRIDYYYASQHCT
ICGEVVQGSAHLCHDCSKNETTVAIALAGRTSKLEKNIQHLTAICRHCGGGDWVVENGVK
CTSLACSVFYERIKVQKELQSLSEVATATGFYPKCMVEWF
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atggggagttcgcagccccaattgttcagcgtcagaattgtttcaattgactattacatg
gcgcctccgattcccgacttcgacatttcttatagtcatttccacggtgggaaggtgaac
gaggttccagtgataaggatatacggttcaactccggctggtcagaagacttgtttgcac
attcatcaaattttaccttatctgtatgttcctatttctgatctggggcctataacaaat
gatgaagctgattcaagcatgcattctgtatctctttcccttgagaaggccctgaagctt
aaaggaaatactggctcaaaacgtcaacatatacatggctgcaatcttgttcgtgcaaag
aagttctatggttatcattcttcagaggagctctttgtgaagatatatttctaccatcca
caggatgtttctcgtgctgcaaatcttcttctggtaggtgctgtaccagatacaaattta
cagccatatgaatcacatataccttttcttctgcagttcttgattgactataatttgtat
ggaatgggccatttacacgtttctaagatgaagtttcgccatcctgttccagatgtttac
tcacaccagaaactcaaatacagtagtaaactgagaacatcaagagatgacaccacttgc
atggattttcaggcagattcagggggtgatttatctttggctactccgatatggatatct
tctacgattcccgatgggtggatatggcaattttcaaatcaactcagttcttcagcaggt
gaagtttatccaatgttcaggcgccagagtacctctgaactggaagcagatgctgtagca
catgatatcgtaaatcagcagtttatatcatatgtctctatgtctcaaactccttccaac
acgaaaatggttcagtcgctaataccaatatgggaggaagaacatgcggcgaatggggtg
actaaagtcacacttcttgatccagagaaaccattaccacgagatgttttaagggatcta
ttaggtggggctgagtttgagaaatttatcgatgtgttagatgattcagataactgctca
cttttgactccagagtcagttaagtcttcagctgtttgtggagattttctcgaccctacg
gctgctaaccttgaagaaagcagttatttgccatccaattatttaaaggcagttgagaag
gatggacctcttatatcattaagttcaccattacagaaatttgttgcagcagaaactaat
gagactgatgcagctaaacaactgcaactatctgccaatgtggaacagtcaactgcaaag
gatgaagatgccttaaggcttttaaagtggcttgcatcatctcaggctacagaagatatc
aactcagatgatgaactcactcgtgagacaattttaagtcccttacttccttcgaaagac
attgacaaagtgttagagagagccaatgtagattatgagagtgaatctcaaaaagagtgt
caagatattcttgattctgttggtatgattaataatgaagaccaggacgccatacccttc
cagtctgccgagtacaatgatcctgtcaaacatttttggagtagggttattccacaagtg
gatggatccagtgacgatccaccatcaactccctgctcaggtgagtcacccaaaacagaa
tatagtgaagcaaagtcaaatgttgaagcacaatcatggtctagaatagcctcaaacttg
agaaataagcatctaaataaaagacctcaatggggttctttacctgtttgttgtcagaaa
gtgagtgattttttgcctcccagtgtaaaagaagatttgggaacttctttgactggaaat
gatacagataaacttccatgtgtaaaagttgataagaagaaagatatatgtcacactggg
aaagctagtgtaatagctgaatgctccacacgggatttgatgaggaggaagcgatcttgt
cgagtcgaacttgctgatcataggagcccagtgggagttcgggatacaaaattctctgat
tctgattgtgcaagcagagatgtataccttgcctcaagatcaaggagttgtgatgaaaac
aaaaaggctcttacttcacggacaaagtcacatgcaaggaatataaattcaagtgttgag
gtctgcagtgaggctattcatataaacccatcttgttcccctgttttaggggaattgcat
ggatcatcttgtgaggatggtatggatgcagaaaatctactaaaaaatgaaaacactgag
tgtgttaatcataattacagctgttctggtgaatatttgcacagcactgttgatagtaat
atgaatgttgacgaatctgaacatgctcatgtttcaactacagagacttttggtaaagtt
ttaggtcgcacaatgctactaactgatattgtggaatcatgtactgtcccttcaaattca
gctgcaactgagcctgcatacgacactgattgcacaagcgaaaggtatccaacctcagtc
tctatccacaagttgctcaactttccaactgagaatttgaagggcatggaaagggagaca
gcagccatgcagtttgaaaagttaccatattgtggaaaagatcctggtatggatgaagct
tatgactcatcaaaagaccaggaagctgaaactgtaaaacttactgctatgaccattctg
aagaaacctccaactatagattggaaagatgagggcaagactgaagctcctttatctctt
cagggaagatctgcaaatgatttgcagcctttctttgagaggaatttcctggaagacgaa
caacttccatgtgttagccctagaaaaagtgggcttgtcgataaccatgaagcagtaatg
ggtgttcctgttctttaccagaatgatgggtcatatttatacatgctgactcctgcaatg
tcacccccatcgaggcaatctgttgatagatggctgttatctgattgctctgacatttcc
aggcacaggatggactcaccaccgcaatttcttccgatatctgatggattatctggtgat
ttggtggaagaacgagattctcaggctactgacagttccatccagcctgagtctgctttt
atgtccatgcatgacaaaaggccaaaccgaactcaaccaccagagcataatcaagagatt
aagaggaaactagaaaccagctgctcactagatacctctcagatatctggtcctgataaa
aagatgaggttcactccattaagtcagattggttttcgagatccagcaagtgctggtgaa
ggacagcagctaacattgcttagtgtggaggtacaggctgagtctagaggggatttaaga
ccggatcctcgctttgatggcatcaatgctatcattcttgttcttcaagaggacaatgca
tctatgtccgatacttatgttcttctgcggtgtgattctgctaatctggaaaaggatctt
gatgcagtttcggagtccaaaacatgtgtttgtcaggaagaatcacaattgcttaatcat
ttcacgaagctaatccatgattttgaccctgatattcttatgggctgggatgttcaaagc
ggttcccttgggtttttggctgaaagggcagcacatcttggcattggtttgctgaataat
atatcgaggacgccatctcgaatcaatatatcttctgcagattataaggcttctgacaaa
gaaaaagattccaaatctgtaactggtgaagtagttcatctagagaactccataattgag
gacgagtggggccggacacatgccagtggtgttcatgttagtggtagaattgtgctcaat
gtctggagactaatgcgtaatgaagttaagctaaatatgtacacagttgaagctgttgct
gagacagtgctgaggcgaaaaattccatacatcccttggaaagtgctaacaaaatggttt
gctagtggccctggacgagcaaggtatagatctattgatcatacaagtgagagagcaaag
ttgaatttacagattctgaatcagctcgatatgataaaccgaacatcagaacttgctaga
gtatttggtattgacttcttttcagtactatctcgaggctcacagtatcgtgttgaatca
atgtttttgcgtttagctcacacacagaactatcttgccatttcccccggaacccaacag
gttgctagtcaaccagcaatggaatgtataccgcttgttatggagccagaatcaaggttt
tatgcagatcctgttgttgttttggattttcagtctctttatccatcgatggtaattgga
tataacctctgctattgtacttgtctgggaaagatcacacctccaatgacacatggactt
ggcgtctgtgcatattcaccacatttaaatacgttacgcaatttgaagcacgagttactg
gtagctccaaatggtgtcgcctatgttccatcaaaggtacggagaggtatactacctagg
ctattggaagagatactatcaaccagaatcatggtgaaacaagcaatgaaaaagttagat
ccgtctcagcttgttcgacacaggatattaaatgctcgacagcttgctttaaagcttata
gcaaatgtcacctatggctatacagctgctgggtttagtggacgcatgccttgtgctgaa
cttgcggatagtatcgtgcagtgtggccgtagaactttggaaactgcaatctctttcgta
aactcaaatgacaagtggaaagctaaagttatttacggtgatacagatagcatgttcgtg
ctccttaaagggcggtctgttcaagaagcgttcgcgattggacgagaaattgcatcagca
ataaccaaaatgaatcccagtcctgtcacattgaaaatggaaaaggtttatcacccatgc
ttcctccttacaaagaagcgatatgttggttacagctacgagagccccgatcagagcaag
ccgatctttgatgctaagggtattgagacagttcgaagagatacatgtgctgctgtatcc
aaaaccatggagcagtcattgaggatctatttcgaaagccaggatatatataaggtaaaa
gcttacgtgctgcgccagtggacgaagatattatctggcagggtctccattcaggacttt
gtttttgcaaaggaggttcgcttgggcacgtacgcagaacatgcttattcacttcctccg
gctgcaattgtggccaccaaattactgcgcaaagaccctcgggcagagcctcggtatgct
gagcggataccttacgttgtgatccatggtgagcccggtgctcgtctaatggacatggtg
gtcgatccgcttgaacttctagccatcaattcccctttcagactaaatgatatctattac
attaggaaacaaatcatgcctgctttgcagagagtgtttgggctggttggagctgatctg
aaccagtggttcctggacacaccccgcccggtgcgcgaaactgctgggaaacgccagact
gttgcgcagaatccacagaggatgagaatcgattattactatgcatcgcagcattgtact
atctgtggagaggtggttcagggatcagctcatctctgccatgattgttccaagaatgaa
acaactgttgctatagccttggcgggaagaacatcgaaactcgaaaagaatatccaacac
cttactgctatatgtcgtcattgtggagggggggattgggttgttgaaaatggcgtgaaa
tgtacttcgttagcgtgctcagttttctatgagagaataaaagttcagaaagaattgcag
tcactgtcagaagtagctacagcaactggtttctacccaaaatgcatggtagagtggttc
taa
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