Salvia splendens (scarlet sage): 121795368
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Entry
121795368 CDS
T07627
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121795368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121795368
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
SR proteins
121795368
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
Inhibitor_I36
Motif
Other DBs
NCBI-GeneID:
121795368
NCBI-ProteinID:
XP_042049823
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Position
3:complement(19259486..19265274)
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AA seq
375 aa
AA seq
DB search
MGRSSRTIYVGNLPGDIRETEIEDLFYKYGHIVDTDLKTPSKAPVYAFVEFEDSRDAEDA
IHGRDGYNFDGYRLRVEPAYEERGSSSYSESGRRASRRSDHRGRSSSTIYVGNLPGDVRE
SEVEDLFHKYGPIVDIDLKTPPRPPIFAFVEFEDPRDADDAIRGRDGYNFDGHRLRVELA
HGGRGSSSKDRISSYSNGSSRGGLSKHSDYRVSVTGLPYSSSWQDLKDHMRQAGDVCFSE
VYRDRYGMRGIVDYTNYDDMKYAIKKLDDSLFKNQFSRSYIRVEEFDARRSYSRSPSRSV
YSRSRSPSRSYSDMSRRSSASVSRSVSPPPSASRYRSRSRTPTSSPAEFRRDSESPWRRR
SRSRSISHSQSELSE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgggccgttctagtcgaacaatttacgttggtaaccttcctggggatattcgcgagact
gaaattgaagacttattttacaagtatgggcatatcgttgatactgatttgaaaacgcct
tcaaaagcacccgtgtatgcttttgtggagtttgaagattcgcgtgatgctgaagatgcc
attcatggccgagatggatataattttgatggctataggttaagggtcgaaccagcatat
gaagagagaggatcctcatcctatagtgaaagtggtcgccgtgcttcaagacgttctgac
cacaggggacgatcaagtagcactatttatgtgggtaatcttcctggagatgttcgggag
agtgaagttgaagatttatttcacaagtatgggcctatagttgatattgatttgaagacc
cctccaagaccacctatttttgcttttgttgagtttgaagatcctcgtgatgctgatgat
gccatccgtggaagggatggctacaattttgatggccatcgattacgggttgaacttgct
catggtggccgaggatcatcatccaaggatcgtatcagcagttacagcaatggaagtagt
cgcggtggactttcaaagcattctgactacagggtctcggtaactggactcccttattct
tcttcgtggcaagacttaaaggatcatatgcgtcaggctggggatgtatgcttttctgaa
gtttatcgtgaccgttatggcatgcgggggattgttgactacacaaattatgatgacatg
aaatatgcaataaaaaagcttgatgattctcttttcaagaaccagttttctcggtcttat
ataagggtggaggaattcgatgctagacgtagttattcaaggagccctagcagaagtgtt
tactcaagaagcagaagtcccagccgcagctacagtgacatgagtagaaggtcttctgct
tctgtttcgagatctgtgtccccacctccctcagcgtcaagataccgatcaagatctagg
actccaacgtcgtctccagctgaattcaggcgtgacagtgagagtccatggaggaggagg
agcaggagcagatccatatcgcattcacagtctgagctatctgagtga
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