Salvia splendens (scarlet sage): 121795372
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Entry
121795372 CDS
T07627
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121795372
04121 Ubiquitin system [BR:
sspl04121
]
121795372
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121795372
Membrane trafficking [BR:
sspl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121795372
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121795372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
Zn_ribbon_6
zf-Nse
CxC4
zf-RING_16
zf-ANAPC11
HypA
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
121795372
NCBI-ProteinID:
XP_042049827
LinkDB
All DBs
Position
1:9063717..9065860
Genome browser
AA seq
321 aa
AA seq
DB search
MSSGGNTHWCHQCSQPVRPRGRNLVCPYCDGGFIQELAEVMGAHAGDDSGLGFMAPQQDP
RFGIMDAFAALMRHRMIGRDPNFDVRGRPAMLSERSVGIGQRPPGQLLILHGQSPVAVDP
FDFFFSDGHGVGQRRADFDDIFMGHGLQELIEQLSMNDRRGPPPAPRSAIDAMPTIKISQ
RHLNTDAHCPVCQDKFELGTRARQMPCDHIYHSDCIVPWLVEHNSCPVCRVELPPLGSAN
AQSNLNQRAENTNSGGGSGGGSSSSSRRDSNSQSQGRWNPFSFLWPSNSSNQNTQRHSGT
EGNSAAAPNEEHGRMRWPFDY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggtggaaatactcattggtgccaccagtgcagtcagcctgtacgacctcgt
ggccgtaacttggtttgcccgtactgtgatggaggctttatacaagagctggccgaagtt
atgggtgctcacgcgggtgatgattccggacttggattcatggctccccagcaagatccg
agatttggtattatggatgcatttgctgccctaatgaggcacaggatgataggaagggac
ccaaactttgatgttagaggacgacctgccatgcttagtgaacgaagtgtgggtattggt
caaaggcctcctggccaattattaatattacatggacaatctccagttgctgtcgatcca
tttgatttcttttttagtgatggacatggagtgggacagagacgagctgattttgatgat
atctttatggggcatggattacaggaattgatagagcagctgagtatgaatgataggcga
ggtcctcctccagcacctcgttctgcaattgatgctatgcctaccatcaagatttcccaa
aggcatctcaatactgatgctcactgcccagtgtgtcaagataagtttgaattgggcaca
agagctagacagatgccatgtgatcatatttaccattcagattgtattgtgccttggcta
gtcgaacataattcatgccctgtctgtcgtgttgagcttcctccactaggttctgcaaat
gcccagtctaacttgaatcagagagcagagaacactaatagtggtggtggcagcggcggc
ggcagcagcagcagcagcagaagggacagtaactctcagagtcagggaaggtggaatcca
ttttctttcctgtggccttcaaactcatcaaatcaaaacactcaacgccattcaggaacc
gaaggaaacagtgccgcggctccaaatgaggagcatggcaggatgcgctggccttttgac
tactga
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