Salvia splendens (scarlet sage): 121795514
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Entry
121795514 CDS
T07627
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121795514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121795514
03036 Chromosome and associated proteins [BR:
sspl03036
]
121795514
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121795514
Coactivators
SAGA/TFTC/STAGA complex
121795514
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121795514
STAGA complex
121795514
TFTC complex
121795514
SAGA complex
121795514
SLIK complex
121795514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
121795514
NCBI-ProteinID:
XP_042049989
LinkDB
All DBs
Position
3:complement(23342847..23347212)
Genome browser
AA seq
490 aa
AA seq
DB search
MDQTPSTPQPTDPPPQTTTATSSVTSAAPTTTTSSTSFTSSNPTPSLKPPTAAQSNNSQT
RPPFNTRPWQQPPYSHFSLPSPPMPASSASTSSSISAPPQPRPGMAIGVPAQRPSTGPPS
PASFSSHTPPAYAQQPQIRQPVQGMGMTGALGASSSMRPAGVSSNQLRPSQSSLRPQSSP
TNQSPAAQNFQGHGMLRVSSLGSPGVLSPSSSQSPQTQNQPWLSSGTQGKPPLPTPSLRP
QASPQSFQPRSHITQQHHHHMPTTPQQQTIGSSQQSPQPSASGQAQDHFNQQFPPPRSIT
HQQQMSRGPGIGTQRPPLGMNVSGASHPGALNKPAIADTEESSNRILSKRSIQEIVNQID
PSEKLDPEVEDILVDIAEDFVESITTFGCLLAKHRKSSTLEAKDILLHLERNWNMALPGF
GGDEIRIFKKPHVNELHRERLAAVKKSMSAAETIFSKNTSGASGSAKGHLSKGTANTISS
PPNAKIREAA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacgccttccactccgcaacccaccgacccgccgccgcaaactacaaccgcc
acctcctccgtcacatccgccgccccaacaaccaccacctcctccacttctttcacatct
tcaaaccccacgccatccctaaaacctcctaccgccgcacaatctaacaattcccaaaca
aggccgccgtttaatacccggccatggcagcagccgccctactcgcacttctctctcccc
tccccgcccatgcctgcttcttccgcctcaacatcctcttcgatttccgctccgccacag
cctcgccccggaatggcgatcggagttcctgctcagcgcccctccactggccccccttcg
cctgcctcattctcttcacacactcctcccgcttacgctcagcagcctcagataaggcag
ccggtgcaaggaatgggaatgactggtgcactgggcgcctcgtcttcaatgcgacctgca
ggcgtgtcttcaaatcagctgaggccttcacagtcatctcttagaccgcaatcgagccca
acgaaccagtctcctgctgcacagaattttcaaggacatggcatgctcagagtttcctca
cttggatctcctggggtactgtcaccgagtagttctcaaagtccacagacccagaaccag
ccatggctgtcttctggaacccaaggaaaacctcctctaccaaccccgtctcttcggcct
caggcaagccctcaatcatttcaaccgagatcccacattacgcaacagcatcaccatcac
atgcctaccaccccgcaacaacagacaattggttccagccagcagtctccacaaccctca
gcctcaggccaggcacaggatcattttaaccaacaatttcctcccccccgatccattact
catcaacaacagatgagcaggggaccaggaattggaacccaaaggccacctcttggcatg
aacgtgtccggtgcatcacaccctggagccctcaataaacctgccattgcagatactgaa
gaatcttccaacaggattttaagtaaacgcagcattcaggagattgtaaatcagattgat
ccatctgaaaaattagatcctgaagttgaagacattctagtcgacattgctgaggatttt
gtggaatcaattacaacatttggttgtttgttggcgaaacaccgaaaatcttccacttta
gaagcaaaagacatactcctgcatctggaaagaaattggaatatggctctccctgggttc
ggcggagatgagataagaattttcaagaaaccacatgtcaatgagctacacagggagagg
cttgctgctgtaaaaaagtcgatgtcagctgctgaaacaatattcagtaagaacacaagc
ggagcatctgggagtgctaaaggccatctgtcaaaaggaactgccaatacgattagctct
cctccaaatgctaaaatacgtgaagctgcatga
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integrated database retrieval system
