Salvia splendens (scarlet sage): 121795635
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Entry
121795635 CDS
T07627
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03440
Homologous recombination
sspl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121795635
03460 Fanconi anemia pathway
121795635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121795635
03036 Chromosome and associated proteins [BR:
sspl03036
]
121795635
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121795635
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
121795635
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
121795635
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
121795635
FA (Fanconi anemia) pathway
Downstream FA components
121795635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
121795635
NCBI-ProteinID:
XP_042050114
LinkDB
All DBs
Position
3:complement(29857157..29863324)
Genome browser
AA seq
1127 aa
AA seq
DB search
MSTWQIFPDDRNDFLWENAVQQLRLEEFSPAVAEDSRRFPSMADLLLLGSSKLLENGKSY
VEEQPTFRTGLGKSVELKQSSIARARSVLGELDYTLIDSGHLDGREKGSACFRPISNMNS
IESAVMSKSVFHSASKNDVHMKNSMFQTGLGKTVSISSAGLHRAKALLGLDGNCDQEQRQ
KQSISSELLSSDNPSHLDTQKLSKLNFSSSTKAGAYPRVKSSTHPNESMNFPECMTAASE
LPQVKFQTAVGRSISVSSDALQRAKSLLGNLEVDSFLNEASTANPLFSVIDGKPSCLSNQ
KDDFTSPFLHHQAIKNGGQPLRKFSSPPSSSSYKRNSFGKSERLQPGNNLIAQFDAEAEG
NSCKRHYNGFTVDRKPPKKKSCSNMDGLEFAILPKSDPSKVTFNTALVDISNTMNIDNKQ
YSGEKKRLRGISSVSPFKKPRSSFVTPLKKTNLSDTNVLSRPAPKESPCKQRVSLRYPSQ
RLRVYLKEYFSQPPLQEKLGNLPEYVKSMNPIAAESFTIRNETSSECIGPEAFYTMLLQS
GASIQHMTKEWVTNHYKWIIWKLTSYERSYAEKFSGKLLTVSSVLEELLYRYEREVNHGH
RSLIKKMLDGDVPPSSMMVLCISSVCEDHDPQCGNQSVPQEGGYVNASRIELTDGWYAVK
ALLDEQLSQKLASKKLFLGQKIRIWGAKLCGWLGPVSPFQASSTTSLLLHINGTYRCHWA
ERLGLCKRAGDPLSFRCIKGNGGVVPSTLVRVTRTYPVLYRERLSNGSFVVRSERLEAKA
LQSFNQRRDLVAEGIMSSFQRETEFDVGDDHEREEGAKLMKLLETAAEPEVLMAGMSSKE
LAAFASYKAKLEAMRLSEIQKTIEKAVQDAGLGERETTPFLRLKVVSLMKKGQQECSPLK
GLVTIWNPTQKQTLELQEGQAYAVGGLVPSSSDSGILYLQTRGSTSGWLPLSPRIIEQFE
SFFVPRSSTTISCLGGVPLSSEFDMVALVVYVGEVYRQGHLQKQWVFVTDESAAELFLEG
SPDVLLAINFCLPYVEFDSSVPMNSSVSGSVVGFSNLTKRKRDQVNGLWVAEATENSDYF
LSYDNGVRRHLKDAAASVAKWATPPNPIIEKLKERVLSIIRNPKHRC
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagatatttcccgacgaccgaaacgatttcctctgggaaaacgccgtt
caacagctccgattggaagaattctctcccgctgtggctgaagactctcgtcgcttccct
tccatggcggatctattgcttctaggttcttcgaagttattggagaatgggaagagctat
gtggaggagcaaccgacttttcgaacggggttggggaaatctgtggagttgaagcagtcg
tcaatcgccagagcacgttctgttcttggtgaactggattacacgttgattgattctggc
cacttggatgggagagaaaagggatctgcttgttttagaccaatatctaacatgaactcg
atagaatcagctgttatgtcaaagtctgtgtttcatagtgcatcaaaaaatgatgttcat
atgaaaaattccatgtttcagacgggattaggaaaaacagtcagcatatcgtctgctggc
ttacatagggcaaaagctctgttaggcctagatggaaattgtgatcaagaacagagacag
aaacaatcaatttcttctgagctcctttcttcagacaatccatctcatttggacacccag
aaactgagtaaattgaatttcagtagttccaccaaggcaggggcatatcctagagtgaag
tctagtactcatccaaatgaatccatgaattttccggaatgcatgactgctgcttctgaa
cttccacaagtcaaatttcaaactgctgtgggaagatccatatcagtttccagtgatgca
ttgcaacgagctaaaagcttgctaggaaaccttgaggttgattcatttttaaatgaagca
agcacagccaatccactgttctcagtaattgatgggaaaccaagttgtttatctaatcaa
aaagatgactttacttcaccatttctgcaccaccaagcaataaaaaatggtggtcagccc
ttgagaaaattttcatccccccctagttcaagttcgtacaagagaaactcatttggtaag
tctgagaggctacaaccagggaataacttgattgcacagtttgatgcggaggcagaaggc
aactcttgtaaaaggcattataatggatttactgtagacagaaagccccctaagaaaaaa
tcatgctcaaacatggatggtttggaatttgcaattctgccaaagagtgatccctcaaag
gtgacattcaatacagctttggtggatatatcaaatactatgaatatagataataagcaa
tattctggagagaagaaaagacttcgagggattagttctgtttctccattcaagaagcct
cgcagttcatttgtcaccccgttaaagaaaactaacttgtcagatactaatgttttgtct
aggccggcaccaaaagagtccccatgcaaacaaagggtttccttgagatacccttctcag
cgtttgcgggtttatcttaaagagtacttttcacagcctccactgcaagaaaagttgggt
aacttgccagaatatgtgaagagtatgaacccaattgctgctgaaagttttacaatacgg
aatgaaacatcttcagaatgtattgggccggaggctttctacacaatgctattgcagtca
ggagcttctatccaacacatgaccaaagagtgggtcacaaatcactataagtggatcata
tggaaattgacctcttatgaaagaagctatgctgaaaagttttctggaaaactgttgacc
gtctctagtgtgcttgaggaattactgtacaggtatgaaagagaagtaaatcacggacat
agatccttaatcaaaaaaatgttagatggtgatgtaccaccttcttcaatgatggtactt
tgcatttcctctgtctgtgaagatcacgacccacagtgtggaaatcagtctgttccccag
gaaggtggctatgttaatgcgtccagaatagagttgactgatggatggtatgccgtgaaa
gctctgttggatgaacagctatcccagaaacttgcttcaaagaaattgtttctgggccag
aagatcaggatatggggagccaaactgtgtgggtggcttgggcctgtttcaccctttcag
gcatcatcgactacaagtttgttattgcacataaatggtacttacagatgtcattgggct
gaaagattaggactatgcaagcgtgctggtgatccattgtcattcagatgcatcaaggga
aatggaggggtagtccccagcactttggtgagggtcacaaggacctatccagttctttat
agggagaggttgagtaatggaagttttgttgtgaggtctgagaggttggaggctaaagct
ctgcagtcattcaaccagaggcgtgatcttgttgctgaaggaataatgtcctcgtttcaa
agggaaacagaatttgatgttggggatgaccatgaacgtgaagagggggccaaacttatg
aagttacttgagactgctgctgagccagaggttctcatggctgggatgagctcaaaagaa
ctagctgcttttgcttcttacaaagctaagctggaggcaatgaggctgtcagaaatccaa
aaaacgattgagaaagctgtgcaggatgctgggcttggggagagagagaccactccattt
ttgcgtcttaaagtggtcagtttgatgaaaaagggtcaacaagagtgcagtccactgaaa
ggcttggttactatatggaatccaactcagaaacagacactggagctgcaagaagggcag
gcatatgctgttggaggtcttgtaccatctagctccgattcaggcatcctttacttacaa
acaagagggtcaactagtggttggttaccattgtcccccaggataattgaacagtttgag
tcatttttcgtcccacgttcatcaactacaatatcatgtttgggaggagttcctctctcc
agcgagtttgacatggtggctctcgttgtgtatgtgggagaggtgtatagacaaggtcac
ctgcaaaagcagtgggtatttgtgactgatgaatctgcagctgagcttttcttggaggga
tcaccagatgtactactggccatcaacttttgcttaccctacgttgaatttgattcatct
gtgccaatgaactccagtgtttctggatccgtggtgggattctctaatcttacaaagaga
aaaagagatcaagtaaatggcttgtgggttgctgaagctacagaaaattcagattatttt
cttagttatgataatggagttcgcaggcatctaaaagatgctgctgcctcagtcgcaaag
tgggcaactcccccgaacccgataatcgagaagctcaaggaaagagttctttccataatc
agaaatccaaaacatagatgctga
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