Salvia splendens (scarlet sage): 121795683
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Entry
121795683 CDS
T07627
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121795683
Membrane trafficking [BR:
sspl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121795683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
FimL_2nd
Motif
Other DBs
NCBI-GeneID:
121795683
NCBI-ProteinID:
XP_042050181
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All DBs
Position
3:complement(32165464..32172960)
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AA seq
1400 aa
AA seq
DB search
MASNPPFSVEDNTDEDFFDKLVNDDDDVDFKATTSPESGGHHAFTDGNESDEANAFANLS
INELEDHGEVNVEQVSSSDLSAVDDLSAKGETVEQISKVETWDEKGIPLVSADSFEFSNL
VQKVGNEDDGANVSHNADTGNTNNVGVSDMPMLSETSSGLEATGVKEVAWGSLEEDLVQK
DSNAFGSYSDFFTEFEGDRPIDAFSNTSGVTSKNGTQDAIGNDVQGSNYMGNVDSCGQYN
NAQNGGVEADQSSSVQDLNSTLYWENQYPGWKYDHNTGQWYQIDGYDGVSSVQGNADSYV
TSTWEEAAITETVSNWNQTSLASDAMETTNWNKVSEVGGDSSVVSAHWNQASNYNNGYPA
HMVFDPQYPGWYYDTIAQEWRALESYTQSAQSNAQVHDQMSKDDNSSTDTFSQNNTLKAS
SLYDQGNNYNPLGFGSKSPDQNWLGSVNNYNQQNSSLHGSQQSNVQYYENLSQHQNDYSM
PSQFVGGNFSQHFNDSKVKQNDQRYFSNDYYNQNPLNFSQQQNQNPQVTYNPALGRSSAG
RPAHALVAFGFGGKLIMMKHNCSNENLNFGSQNPLAGSISVLNLSEVLTGNIDTVNHGRG
VSTYFQALYQHTLPGPLTGGSVATKELNKWIEERLSNSEPADMDYRKAEVLRLLLSLLKI
ACQYYGKLRSPYGTDAVMKQENDAPESAVAKLFASAKRNALQFNQYGNVTQCLQQLPSEG
QLQATAAEVQNLLVSGRKKEALQCAQEGQLWGPALVLAAQLSDQFYGETVKQMALCQLMA
GSPLRTLCLLIAGQPADVFSADTTAVNNMAGSVNVPQQPTQFGANCMLDDWEENLAVITA
NRTKDDELVLIHLGDCLWKERTDTIAAHICYLVAEASFEPYSDSARLCLIGADHWKMPRT
YASPEAIQRTEIYEYSKTLGNSQFFLLPFQPYKYVYALMLAEVGRTTDALKYCQAVLKSL
KTGRTPELENLRNLVSSLEERIKAHQQGGFSVNSAPKEFIGKLLNLFDSTAHRVVGGLPP
PIPTQGGAVHGNENNYQSAGPRVSSSQSTMAMSSLVSQSMEPINEWAADNKKTMHTRSVS
APDFKRSPMQSQAEPPKETSSASTQDKAPAAGNTSRLGRFSFGSQLFQKTVGLVLKPRGR
QAKLGDTNKFYYDEKLKRWVEEGVEPPAPEAALPPPPKASVFQNGASEKSFLQSEPPHNN
GNQEFISPSTMDNSSGMPPLPPTANQYSARGRMGVRSRYVDTFNRGGGNTVSGFSPSVPS
AKPAGGANPKFFVPAPVSHGEQPVVDTHVEQKQNTSFTTYEDASSSPPNETFYSPRPSSP
MAPMPRFGSMNNIYNKGASDSSFASDSRRTVSWGGSINDAMSPPNRTQPAGESVSMRPPS
FMPNDTLLVDSSVNGGGFGE
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccattttcggtggaggataatacagacgaagattttttcgataaa
ttagtgaatgacgacgacgatgtggattttaaagccaccacatcgccggaatctgggggc
catcatgccttcacggacgggaatgaatcagatgaggctaatgcttttgccaatttgagt
atcaatgagcttgaagatcatggtgaggtcaatgttgaacaggtctccagtagtgatctt
agcgcagttgatgatttaagtgcaaaaggggagactgttgaacagattagcaaagtggaa
acatgggatgaaaagggaattcctttagtatcagctgattcatttgaatttagtaacttg
gtacaaaaagtgggaaatgaagatgacggtgctaatgtttcgcacaatgctgatactggt
aatactaataatgtgggtgtctctgacatgccaatgctgagcgagactagtagcggatta
gaagctactggagtgaaagaagttgcttggggttccttggaggaggatttggttcagaag
gatagtaatgcctttggatcatactcagactttttcactgaatttgaaggggaccgtccc
attgatgcatttagcaacacatcaggggttacttcaaagaatgggacacaggatgccatt
ggaaatgatgtacagggatccaattatatgggtaatgtagacagttgcgggcagtacaat
aatgcacagaatggtggtgttgaagcagatcagagttcatctgtgcaggatttgaatagc
accctgtactgggaaaatcaatatccaggttggaagtacgaccacaatactggacaatgg
tatcagattgatggctatgatggtgtttctagtgtgcaaggaaatgccgactcttatgta
acttctacatgggaagaggccgctataactgagactgtttctaattggaatcagacctct
ctggcaagtgatgccatggaaacgacaaactggaataaggtgtcagaagttggtggtgat
agcagtgtggtttcagcacactggaatcaggcttctaattataataatggttacccagct
catatggtctttgatcctcagtaccctggatggtactatgatactattgcccaagaatgg
cgggctttggagtcatacacccaatcagcgcagtctaatgcacaagttcacgatcagatg
agtaaggatgataattcatctactgatacattttctcaaaacaacactctgaaggcaagc
agtttgtatgatcaaggtaataattacaatcctctaggctttggcagcaaaagcccagat
cagaattggttgggatcagtcaacaactacaaccaacagaactcaagtctgcatggaagt
caacaaagtaatgtccaatattatgagaatctaagccagcatcaaaacgactattccatg
ccttcccagtttgttggtggaaacttcagtcaacatttcaatgactccaaagtcaagcaa
aatgaccagagatacttttcaaatgactattataatcaaaaccccttgaacttctctcag
caacagaatcagaatcctcaagtgacatacaatccagcgttgggaaggtcatctgctggt
cgtccggctcatgctttagttgcctttggttttggtggcaagctcattatgatgaaacat
aactgctctaatgaaaatttgaattttgggagccagaatcctttggccggctcaatatct
gttctcaacttatcagaagttttgactggaaacattgatactgtaaaccatggaaggggt
gtaagtacttatttccaggctctctaccagcacactcttccaggtcctctaactggtgga
agtgtggccactaaggagttgaataaatggattgaggaaaggttatcaaattctgagcct
gcagatatggattacagaaaggctgaagtattgaggctgctcctgtcactattaaaaata
gcctgtcagtattatggaaaacttcgatctccttatggcacggatgctgtgatgaagcag
gaaaacgatgccccagaatcggcagttgccaaactgtttgcttctgctaaaagaaatgct
ttacagtttaatcagtatggcaatgttacccaatgcctgcagcaacttccatctgaagga
cagttgcaggccactgctgccgaggttcaaaatcttctggtttctggaagaaagaaggag
gctttacaatgtgcacaggagggacagttgtggggtcctgcccttgttcttgctgctcaa
cttagtgatcaattctatggtgaaactgtcaagcaaatggcactttgccaattaatggct
ggatcacccttgcgaacattgtgcctgctcattgctggccaaccagctgatgtcttttct
gcagatactacagctgttaacaacatggctggttctgtaaatgtgcctcaacaacctaca
cagtttggagctaattgcatgctggatgactgggaagaaaatttggctgtgataactgca
aatagaacaaaggacgacgaacttgtgcttattcatcttggtgattgtttgtggaaggaa
agaactgatacaattgctgctcatatatgctatttggttgcggaagctagctttgagccg
tattcagacagtgcaagattgtgtctcatcggtgcagatcactggaaaatgccacggacg
tacgcaagtccagaagcaattcagagaacggagatatatgagtattcaaagacacttggg
aactctcagttcttcctacttccatttcaaccttataagtatgtatatgcactcatgttg
gctgaagttggaaggacgaccgatgcactgaagtactgtcaagcggtactaaaatcgctt
aaaactggtcgaacaccggagctggagaatctgaggaatttagtttcatcccttgaggaa
aggattaaagctcatcaacagggaggattctctgtaaactcagctcccaaggaatttatc
ggtaaattgctaaacctttttgatagcactgcacatcgggttgttgggggcctgccaccc
cctataccaacacaaggcggtgcagttcatggtaatgagaataattatcagtccgccgga
cccagagtatcaagtagtcaatcaacaatggctatgtcttcattagtttctcaatctatg
gagcctataaatgaatgggcagctgataacaaaaagactatgcacacaagaagtgtttca
gcacctgactttaaaaggagtccaatgcagagtcaggctgaaccaccaaaagaaactagt
tctgctagcacacaggacaaagcaccagctgcaggcaatacgtctcgcttgggtcgtttt
agttttggatctcagctatttcagaagactgttggtttagtactcaaaccacgaggccgt
caggcaaaattgggtgatacaaataagttttattatgatgaaaaactcaagagatgggtg
gaggaaggtgttgaacctcctgcacctgaagcagctcttccaccaccacccaaggcttct
gtttttcagaatggagcatcagaaaagagtttcttgcaaagtgaacctcctcataacaat
gggaatcaagaatttataagcccaagcactatggataacagttcaggaatgcccccactt
cctccgacagccaatcagtactcagcacgtggaaggatgggtgttcgctctaggtatgtt
gacactttcaacagaggtggtgggaatacagtaagtgggttctcgccttctgtaccttct
gcaaaacctgcgggtggtgccaacccaaaattctttgttccggcaccagtatcccatggt
gagcagccagttgttgacacgcatgtagaacaaaagcaaaacacttcattcactacttac
gaagatgcttcttcctcccctccaaatgagacattctattcgcctcgtccctcatctccc
atggcgcccatgccaagatttggaagcatgaataacatatacaacaaaggggcaagtgat
agttcctttgcgtcagactcacggcgtactgtttcgtggggagggagcataaatgatgca
atgagccctccaaataggacgcaacctgcaggagagtcggtgagtatgcgtcctccttct
ttcatgccaaatgacactttattagtagattcctccgtgaatggtggtggtttcggagaa
taa
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