Salvia splendens (scarlet sage): 121795816
Help
Entry
121795816 CDS
T07627
Name
(RefSeq) rhomboid-like protein 20 isoform X1
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121795816
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
121795816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
DER1
UBA_RAD5A
CUE
Motif
Other DBs
NCBI-GeneID:
121795816
NCBI-ProteinID:
XP_042050369
LinkDB
All DBs
Position
3:35587880..35591492
Genome browser
AA seq
290 aa
AA seq
DB search
MNGGPSGFNNAPVTRTIVIVSALFTIIFGIQGRSRNLGWSYQDIFRKLQIWKLIVSVFGF
SSTPELLFGIYLLYYFRVFERQIGSNKYTVFITFSIAISILLEVFALLLLKDPSLNILTS
GPYSLIFSSFVPFYFDIPVSTRFHVLNLKFSDKTFIYLAGLQLFLSSWKRSMVPGICGIL
AGSLYRMNILFPEAIASFFSRLSLPSSMGSSTPATGSSRNVVGSAPAYPGRQMEGNYPAP
TLSTSMEPPEDSIATLVSMGFDRNSARQALVRARNDINAATNILLESQGH
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggcccttctggttttaataatgcgccggtgacaagaacgattgtgattgtc
agtgctctttttacaatcatttttgggatccaaggtcgttctagaaacctcggttggtca
tatcaggacatcttcagaaaacttcaaatatggaagctcatagtttcagtttttggattt
tcatctacaccagaacttttatttggaatatatcttttgtactacttccgtgtatttgag
aggcagataggttctaataaatacactgtttttatcacattctccatcgccatctctata
ctgcttgaagtctttgcgctactactacttaaagatccctcgttgaatatactgacatct
ggaccctacagccttatattttcttcgttcgtacccttctattttgacattcctgtttca
acgcggtttcatgtgctaaaccttaaattctctgacaagacttttatatatctagccggt
cttcagctatttttgtcatcttggaaaagatccatggtgccagggatttgtggtatttta
gcggggtccctgtatcgcatgaatattctttttcctgaagctattgcttcattcttctca
agattgtctttgccatcatcgatgggaagtagtacgccagccactggatcatctcggaat
gttgtaggaagcgcaccggcctatcctggtcgccagatggagggaaactatccagctccg
accctgtcaacatcgatggaaccaccagaagactccatagccacactggtctcaatgggc
ttcgacaggaactcagcaaggcaagccctcgtacgtgccagaaacgacattaatgctgcc
accaacatcctcctcgagtctcaggggcattaa
DBGET
integrated database retrieval system
