Salvia splendens (scarlet sage): 121795854
Help
Entry
121795854 CDS
T07627
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121795854
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121795854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
HU-CCDC81_bac_1
DUF4399
Motif
Other DBs
NCBI-GeneID:
121795854
NCBI-ProteinID:
XP_042050420
LinkDB
All DBs
Position
3:36656087..36665222
Genome browser
AA seq
877 aa
AA seq
DB search
MDYKQRLISAAKCVYAGDFRAAGEAPIDSLDYGIQAALKPHQVEGVSWLIRRYHLGVNSI
LGDEMGLGKTLQAVTLLSYLKVFLKISGPFLVLCPLSVTDGWVSEVANFAPKLRLLRYVG
EKEYRRKLRREMSEYVKESLLTSRVPSFPFDVLLTTYDIALIDQDFLSQFPWHYAIVDEA
QRLKNHSSVLYTVLRERFVMPRKLLLTGTPVQNNLTELWALMHFCMPLIFGTLEQFHSDF
KEAGDPSSGQGAQKVKEPFKILKYVLGAFMLRRTKSTLMESGTLLLPPVTEITVMAPLSP
LQKKVYMSIIRKELPKLLALASKGTNAPSLQNIVIQLRKACSHPYLFPGIEPEPYQEGEH
LVQASGKLLILDQLLRKLHDAGHRALLFAQMTHTLDILQDFLEMRKYTYERLDGSIRAEE
RFAAIRNFSIKSSANINSCESTPYIFLISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQA
LQRAHRIGQSNHVLSINLVTGRTVEEVIVNRARRKLQLSHNVIGDEMLDCEGSNGGTEAG
DLKSVILGLHIFDPMEMNIDKSDNQLDKSELAVLADKVIVSRHELQSDVRDRKLGINSMD
RASDQNLMKQDASESIDFNPDLDEASYTAWVEKFKQASPEQDSDILESGNKRCLPDEKHL
KAEAARRKAEEKKMSKWETLGYHSLAVSNHVSPVNQDEVSDAGSVHFVYGDCTTAAAVTP
SESTIIFSCVDDSGNWGHGGLFDALARLSASIPNAYQRASEFGDLHLGDLHLIEVTEDHG
DQSTSTDPRRWVGLAVVQSYNLRRKVPRRDISTADLEVCLAKASFSAAQYSASIHMPRIN
YQHGTDRSEWYTVERLLRKYAAMYGINIYVYYYRRSE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggactacaagcagaggctgatttcggcggcgaaatgcgtctacgccggcgattttcgc
gctgctggagaagcgcctattgattccttggattatgggatccaagcggcactcaaaccg
caccaagtcgaaggcgtgtcctggctcatccgccgctaccacctcggcgtcaactccata
cttggcgacgagatgggactggggaaaacgctgcaggctgtaacacttttgagttacctg
aaagtgtttctgaaaatttctgggccattcctggtcttgtgccctctcagtgtaactgat
ggttgggtctcagaagtggcgaatttcgctccaaagttgagattgcttcgttatgttggg
gaaaaagaatatagacgcaaattgcgaagggaaatgagtgaatatgtaaaagaaagtcta
ctcacatctcgcgttccatcatttccgtttgatgtgctgttgacaacttatgacatagca
ttgattgatcaggactttctgtcccaattcccttggcattatgcaatagttgatgaagca
cagagacttaaaaaccattccagtgtcttatatactgttttgagagaacgattcgtcatg
ccaagaaaattgcttctcactggaacaccagttcaaaacaatcttactgaactttgggct
ctgatgcacttctgtatgccattgatctttggaacactggagcagtttcattctgatttc
aaggaagctggagatccttcatcaggtcaaggtgcacaaaaagtgaaggaaccgtttaag
atcttaaagtatgtgctgggtgcatttatgcttcgaaggaccaaatctacacttatggag
tctggcactctgctactgcctcctgttactgaaataactgtgatggcacctttgtctcca
ctgcagaaaaaggtttatatgtcaataatcagaaaggaacttccaaagctgcttgcactt
gcttctaaaggaacaaatgctccatctttgcaaaatattgtaattcagctccggaaagca
tgtagccatccatatcttttcccgggtattgagcctgaaccatatcaggagggtgagcac
ctggttcaggctagtggcaaacttctaattttagatcagctacttaggaagttgcatgat
gctgggcatcgcgctctattgtttgcccaaatgactcatactcttgacatattgcaggat
ttcttagaaatgagaaaatatacctatgagcgtcttgatggttcaattcgagcagaagag
cgatttgctgcaattagaaatttcagcataaaatcaagtgctaatattaactcttgtgag
agcacaccatatatctttttgatatccacacgagctgggggagtgggactaaatcttgtg
gctgctgatacagtcatattttacgagcaagattggaatccccaagtggataagcaggct
ttgcagcgtgcacatagaattggccagagtaatcatgtgctatctattaatttggttact
gggcgtacagttgaggaggttattgtgaatagagcaagaaggaagctacaactcagtcat
aatgttataggagatgaaatgctggattgtgagggaagtaatggaggaactgaagctggt
gatttgaaatctgtcatacttggtttgcatatctttgatcccatggagatgaatatagat
aaatcagataaccaattagataagagcgaactagctgttttagctgataaggtcattgtg
tcccgccatgagttacaatcagatgtgagggataggaagctagggatcaattcaatggat
cgggcgagtgatcaaaatttaatgaagcaagatgcttctgagtctattgactttaatcca
gaccttgatgaagcttcatacacggcatgggtcgagaagtttaagcaagcatctccagaa
caagacagtgacatactggaatcaggaaataagagatgcttacctgatgagaaacatctt
aaagcggaagctgctcgaaggaaggcagaggagaaaaaaatgtccaaatgggaaacacta
ggatatcactcacttgctgtcagcaatcatgtcagtccagtcaatcaggatgaggtgtca
gatgctggctcagttcattttgtttatggagactgcacaactgctgcagcagttacccct
tccgagtccacaattatattcagttgtgttgatgattctggaaattgggggcatggaggt
ctgtttgatgcactggctaggctgtcagcatctattcccaatgcatatcagcgggcttca
gaatttggagatctccatctgggtgatttacatctcatagaagttactgaggaccacggt
gaccagagtactagtactgatccacgtcgatgggtcggtttagctgttgtgcaatcatat
aatctgaggcgtaaagtccctcgtcgtgatatctctacggctgatttggaagtttgcctt
gcaaaagcatcattttcagccgctcaatattcagcttcaatacacatgccccggattaat
tatcagcatggtacagatcgctcagaatggtatactgttgagcgcctgctacgaaaatat
gcagcgatgtatggcataaatatttatgtatattattatcggcgttcagaatga
DBGET
integrated database retrieval system
