Salvia splendens (scarlet sage): 121795902
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Entry
121795902 CDS
T07627
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121795902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121795902
03036 Chromosome and associated proteins [BR:
sspl03036
]
121795902
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
121795902
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
121795902
RSF complex
121795902
WICH complex
121795902
B-WICH complex
121795902
NORC complex
121795902
BRF complex
121795902
NuRF complex (fruit fly)
121795902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DBINO
DEAD
HDA2-3
Myb_DNA-binding
YnfE
ToxN_toxin
AAA_14
Motif
Other DBs
NCBI-GeneID:
121795902
NCBI-ProteinID:
XP_042050500
LinkDB
All DBs
Position
3:38111595..38119284
Genome browser
AA seq
1065 aa
AA seq
DB search
MAKPSRAKGSSDDSMTSSSAEEEVARDQVNDEEDDDELQAVARTVEDSDDEDAPNAADQY
EDDIEEEDVVANEISKRERARLKEMQRVKKQKIQEILDVQNAAIESDMNNKGKGRLNYLL
QQTELFAHFAKGDQSVSQKKGKGRGRHASKITEEEEDEECLKEEEDGIAGTGNTRLLVQP
SCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEFRGITGPHM
VVAPKSTLGNWMNEIKRFCPVLRAVKFLGNPDERRYIREELLVAGKFDVCVTSFEMAIKE
KTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWALLNF
LLPEIFSSAETFDKWFQISGENDEHEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILK
VGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYSTG
EHLIENAGKMVLLDKLLPKLKERNSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGG
EDRDASIEGFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHR
IGQKKEVQVFRFCTEYAIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFG
AEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTADLYDFDDEK
DENKFDLKKIVSDNWIEPPKRERKRNYSESEYFKQTMRQSGPVKPKEPRIPRMPQLHDFQ
FFNTQRLSELYEKEVRCLMQAHQRNQVKDTIDVDEPEDVGDPLTAEEQEEKERLLEEGFS
TWSRRDFNTFIRSCEKYGRNDIRGIASEMEGKTEEEVERYAKAFKDRYKELNDYDRIIKS
IERGEARISRKDEIMKAIGKKLDRYKNPWLELKILYGQNKGKLYNEECDRFMICMVHKLG
YGNWDELKAAFRTSPLFRFDWFIKSRTTQELARRCDTLIRLVERENQEYDERERQARKEK
KLAKQNATPSKRAAARQAAESPPSTMKKRKQSSMDDYVSSGRKRK
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccctcgcgtgcaaagggctcatccgacgactcgatgactagctcctcggct
gaggaggaggtggccagggaccaggtcaatgacgaagaagacgatgacgagctccaggcg
gtggctcgcaccgtcgaagattccgacgacgaggatgctcctaacgctgccgatcaatac
gaagatgacattgaggaagaggatgttgttgcaaatgaaatttcaaagcgcgaaagagca
aggcttaaagaaatgcagcgggtaaaaaagcagaaaatacaagaaatacttgacgtgcag
aatgctgctattgagtctgacatgaacaacaaaggaaagggtcgtttgaactatctttta
cagcaaacagagttatttgctcattttgccaagggtgatcagtctgtttctcagaagaag
ggaaaaggcaggggccgccatgcatcaaagataactgaagaagaagaagatgaagagtgt
ctcaaagaggaagaagatggcatagctggcacaggaaacactagactattggtgcagccc
tcttgtattcagggaaagatgagggactaccagctagctggtttaaattggctgattcgg
ttgtatgaaaatggcattaatgggatacttgctgatgaaatgggacttggtaaaactttg
caaacaatatccttgatgggctacttgcacgagttcagaggaattacaggtcctcacatg
gttgttgctccaaaatccacacttggaaattggatgaatgaaatcaaaaggttttgccca
gtgctgcgtgctgtaaagttccttggaaatcctgatgaaaggaggtatattcgcgaggag
ttacttgttgctgggaagttcgatgtttgtgttacaagttttgagatggccatcaaagaa
aagactacattgcgacgatttagttggcgctatatcattattgatgaggctcatagaatc
aagaatgagaattcccttctctcgaaaacaatgaggctctataataccaactaccggctt
cttattactggaacaccacttcagaataatcttcatgaactctgggctctcctcaacttc
ttgcttccagaaatatttagttctgcagagacgtttgacaagtggttccaaatttctggt
gaaaatgatgaacatgaagttgtccaacaacttcacaaggttctccggcccttccttctt
agaaggctaaaatctgatgttgagaaaggtttacctcccaagaaggagacaatacttaaa
gttggtatgtcccaaatgcaaaagcaatactataaggcattgctacagaaagatcttgag
gtggtaaatgctggtggagaacgcaaacgccttcttaatatagccatgcagctccgaaaa
tgttgtaatcatccatatttgtttcaaggtgcggaacctggcccaccttatagcacggga
gagcatctcattgaaaatgctggcaagatggttcttctggacaagttgctcccaaaatta
aaggaacgcaattccagggttttgatattttcccagatgacaagactgctagacattctt
gaggattacttaatgttccgtgggtacctctattgccgaattgatgggaatacaggggga
gaagatcgagatgcttccattgaaggcttcaataaaccaggaagcgaaaaatttgtcttt
ctgctgtcaactagggctggaggtcttggtatcaatcttgcgactgctgatgttgtcatt
ctttatgatagtgactggaacccacaggttgatttacaagcacaggatcgagctcatagg
ataggacagaagaaggaagttcaagtattccgattctgcactgagtacgctattgaggaa
aaagttattgaaagggcctataagaagcttgctcttgatgccttggttatccagcaaggg
agactagcagaacaaaagactgtgaataaggatgagctgttgcaaatggtaaggttcggt
gctgaaatggttttcagctccaaagatagcacgattacagatgaggatatagatcgaata
attgccaagggagaagaagcaacagctgaacttgatgccaagatgaaaaaatttactgaa
gatgccatcaaattcaaaatggatgacactgctgatttgtatgattttgatgatgaaaag
gatgaaaataagttcgatttgaagaaaattgtcagtgataattggattgaaccaccaaaa
agagagaggaaacgcaattactcagaatcagagtacttcaagcagacaatgcgtcaaagt
ggtcctgtgaagcccaaggagcctcgaattcctcgcatgccgcaattgcatgatttccag
ttcttcaacacacagcgtcttagcgagctgtatgagaaagaagtgcggtgtcttatgcaa
gcacatcaaaggaatcaagtaaaagataccatagatgtggatgaaccagaagatgtagga
gacccattgaccgctgaggagcaggaagagaaggagcggttgctggaagaaggattttca
acttggagcagaagagactttaacacatttattaggtcctgtgagaagtatggccggaat
gacatcaggggtattgcttctgaaatggaagggaaaacagaggaagaagttgaaagatat
gctaaagctttcaaggatagatataaagaactcaatgattatgataggatcatcaaaagc
attgaaagaggagaggctaggatatcacggaaagatgagatcatgaaagccattgggaag
aagctggatcgctataaaaacccttggctggaattgaagatcctgtatggccagaacaaa
gggaagttgtacaatgaagaatgtgatcgtttcatgatatgcatggttcataagctcgga
tatggtaactgggatgagctcaaggcagccttccgtacttcaccattgttccgcttcgac
tggtttataaagtctcgtacgactcaagaacttgcaaggagatgtgatacactaattagg
ttggtagagagggaaaaccaagaatatgatgagagggagaggcaggcacgcaaagagaag
aaactagccaagcagaatgcaaccccatccaagcgcgctgctgccagacaggctgccgag
agccccccatcaactatgaagaagcggaagcaatcatcgatggatgactatgtgagctcg
ggaaggaagaggaaatga
DBGET
integrated database retrieval system
