Salvia splendens (scarlet sage): 121796016
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Entry
121796016 CDS
T07627
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121796016
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121796016
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
121796016
NCBI-ProteinID:
XP_042050636
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Position
3:39815514..39819622
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AA seq
449 aa
AA seq
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MAMDSKKLAVSLFSAMLFLFFVGAMARVEKSQTAIPRFSEAENLQSSPNSTMAEKLGGND
EDALNEHAVADPEEVVRMVEMATQNSTERRKLGYFSCGTGNPIDDCWRCDANWHKNRKRL
ADCGIGFGRNAIGGRDGRFYVVTDPNDDNPVNPRPGTLRHAVIQDKPLWIVFKRDMVIKL
KQELIMNSFKTIDGRGANVHIAGGGCITIQYVTNVIIHGLHIHDCKPTGNAMVRSSPSHY
GWRTMADGDAISIFGSSHVWVDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVMLLG
HSDSYTRDKQMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIN
SQGNRYLAPSNPFAKEVTKRVDTNQGQWKGWNWRSAGDLMLNGAYFTPSGAGASASYARA
SSLGAKSSSMVGTITSGSGVLGCRRGHQC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggattcgaagaaattggcggtgtctctgttttcagctatgctgtttctgttt
ttcgttggagctatggcgagagttgagaaatctcaaaccgcgataccgaggttcagtgag
gcggagaatttgcagagctccccaaactcaacaatggcggaaaagttgggaggcaatgat
gaggatgccttgaatgaacatgctgtggctgatccagaagaggttgtgagaatggttgaa
atggccactcagaacagcacggagaggcgaaaactgggatatttctcatgcggaaccggt
aaccccattgacgactgttggcgttgtgatgccaattggcacaagaaccgcaagcgccta
gcagactgtggcattggttttgggcgcaacgccattggaggccgtgatgggcgtttctat
gtcgtgactgaccctaacgatgacaaccccgtgaaccccaggccgggaactctaaggcat
gctgttatccaagataagcccctctggatcgtgttcaagcgcgatatggttatcaagctg
aagcaggaactgatcatgaacagtttcaagaccattgatgggcgtggcgcgaatgtccac
atagctggtggaggctgcatcactatccagtatgtcaccaatgtgatcatccatggcctc
cacatccatgactgcaaaccaactggcaatgccatggtgaggagctcgccttcccactac
ggttggaggactatggctgatggcgacgccatttccatctttgggtcgagccacgtctgg
gtggatcacaattcgctctctaactgtgcagatggccttgtggacgctgtgatgggatcc
accgccattaccatttccaacaattacttcacccaccacaatgaggttatgctcttgggc
cacagtgactcctacacgagagacaagcaaatgcaggtcaccattgccttcaatcacttt
ggtgaaggccttattcagagaatgccaagatgccgccatggatacttccacgtggtgaac
aatgactacactcactgggagatgtacgccattggtggaagcgcaagccccacgatcaac
agccaaggcaacagatatcttgcaccaagcaatccttttgcaaaagaggtgacaaagagg
gttgacacgaatcaaggtcaatggaaggggtggaactggagatccgcgggcgacctcatg
cttaatggagcttacttcaccccatccggagccggagcttcagccagctatgcaagagct
tcaagcttaggcgccaagtcatcatccatggtaggaaccattacatctggatccggtgtt
cttggatgccgccgtggtcatcagtgttaa
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