Salvia splendens (scarlet sage): 121796027
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Entry
121796027 CDS
T07627
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13-like isoform X1
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121796027
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121796027
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Helicases
121796027
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
121796027
NCBI-ProteinID:
XP_042050657
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All DBs
Position
3:complement(40113993..40120734)
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AA seq
824 aa
AA seq
DB search
MASESAERKKAYRKLKKRARSEMDQQLERLESLPWSSSLPASNGDGDGDDDLSLFIGSNE
LEGGFLTLEEIDEAEYGLEIPNVKVETKRKDLKGKKESKRSKLKEGDADESLDADSYGEC
SDKDEESKEGDEKKKQKKKKKERKKKEGEKKKDNQKNDETDKAQENAETGTASDAKDDCD
VEEELIDEDEYYSWNELRLHPMIMKSIYRLKFKEPTPIQKTCIPAAAHQGKDVIGAAETG
SGKTLAFGLPILQRLLEEREKAERLMVEKADGSDGIAPQGGLRALIVTPTRELALQVTDH
LKAVALGTNVRVVPIVGGMSTEKQERLLRGRPEIVVGTPGRLWELMSGGELHLVEMHCLS
FFVLDEADRMIEAGHFRELQSIIDMLPMGKEPTESQPDNTQNCVTLANLPRKKRQTFVFS
ATLALSADFRKKLKHGSLRAKKDDLSSFETLSQRAGMRPNTAIVDLTSSSILANKLVESI
IECQEDEKDAYLYYILSIHGQGRAIVFCTSIAALRRISSILRILNLDIWTLHSEMQQRAR
LKSIDRFRANEHVVLVATDAAARGLDIPGVRTVVHYQLPLSAEVYVHRCGRTARASTDGC
SIALISPNDASKFASLCRSFSKESFQRFPVEVSCMPEITKQSSLAHQIDKIARKGSQEKA
ERSWLERNAESVELILDDNDSEEDRVKKYRQNKAQSNKLKQLQQELNTLLSRPLQPRTFS
KRFVTGSGVSSLLQNQFEEIARRKPEDANDLGPNKRRRLVVIGQNCVEPLQALRSASNEP
HLDLKAIAEKQRNSNDLRRKRKDMKKRLHEQRRKQRKQLKKGQD
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggagtctgccgagaggaagaaagcttatcgtaagttgaagaagcgagctcga
agcgagatggaccagcagcttgaacggctggagtcgctgccctggagctcttcgcttcca
gcgagtaatggcgacggcgacggcgacgatgatctctctctcttcatcggctccaacgaa
ctagaaggagggtttcttactctcgaagagattgatgaagcagagtatgggttggaaatc
cccaacgtcaaggttgaaaccaagagaaaagatttaaaaggaaaaaaagaatcaaagaga
agtaagctaaaggaaggggatgctgatgagagcttagatgctgatagttatggtgaatgt
agtgataaggatgaagaaagcaaagagggtgatgagaagaagaagcagaaaaagaagaaa
aaggagaggaagaaaaaagagggggagaaaaagaaagataatcagaagaatgacgagaca
gataaagcacaggaaaatgcagagacgggtaccgctagtgatgcaaaggacgattgcgat
gttgaagaggaattaattgatgaagatgaatattattcatggaatgagttgagacttcat
cccatgattatgaaatcaatatacaggctcaagtttaaggagcccactccaatacaaaaa
acttgcattccagctgctgctcatcaagggaaggatgtaattggtgctgctgagacagga
tctggtaaaacacttgcctttgggttacccatcttacagcgtcttctggaagaacgagaa
aaggccgagaggctcatggtcgaaaaagcagatggcagtgatgggattgctccacaaggg
ggtctacgtgctctcattgttacccctacgagggagcttgcactccaggtgacagatcat
ctcaaggcagttgctttaggcaccaatgttagggtagttcctattgttggtggtatgtca
actgagaaacaggaaagacttctgagaggaaggcctgaaattgttgttggaacaccaggc
agactgtgggaacttatgtcaggtggagaactgcaccttgtggagatgcactgcttgtca
ttttttgtgctagatgaggccgaccgcatgattgaagctggtcatttccgcgagttacag
tccatcattgacatgcttccaatgggcaaggaaccaacagagagccagcccgataataca
caaaactgcgtgactcttgcaaaccttcctaggaagaaaagacaaacctttgtgttttct
gcaactctagcattatcagctgatttccgtaagaagttgaagcatggatctttgcgtgca
aaaaaagatgatcttagttcatttgagaccctttcacagagagctggaatgagacctaac
actgctatagtggatcttactagctcttcaattttagcaaacaagcttgtggaatcaatt
attgagtgtcaagaagatgaaaaggatgcctatttgtattacatattaagcattcatgga
cagggccgtgcaattgtcttttgcacctccattgcagctctacgccgcatttcttccata
ttgcgtatcctcaacttagatatctggacccttcattcagaaatgcagcagagggcacgt
ctgaagtcgatagatcgtttccgagcaaatgaacatgtcgttcttgttgctacagatgct
gcggcacgaggccttgacattcctggtgttcggaccgtggttcattaccagcttccactt
tcggctgaagtatacgtccatagatgtggaagaacagctagagcctctacggatggttgt
agcattgctctaatatcaccgaatgatgcatcaaaatttgcgtctttgtgcagatccttt
tcaaaggaaagtttccagcggttccctgttgaggtctcatgcatgccagagattacgaag
caatcatctcttgcacatcaaatagacaagattgccagaaagggttcccaggaaaaggct
gagagaagttggttggagcgaaatgctgaatcagttgaattgattttggatgataatgat
agtgaggaggacagagtgaagaaatatcggcaaaacaaagcccaatcaaataagttgaag
cagttgcagcaggagctcaacacactactttccagaccattacaacccagaacattttca
aagcgctttgtgactgggtctggtgtttcgtcgctgcttcaaaatcaatttgaagaaatt
gcaaggagaaaaccagaggatgcaaatgatttaggtccgaataaaaggagaaggttggtc
gttataggtcaaaattgcgtagaaccacttcaggcattgcgcagtgcaagtaatgagcca
cacttggatctcaaagcaattgcagaaaagcagagaaattcaaacgacttgagaaggaag
aggaaagatatgaaaaaacgtttgcacgagcaaagacgaaagcaacgaaaacaacttaag
aaaggacaagattag
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