Salvia splendens (scarlet sage): 121796260
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Entry
121796260 CDS
T07627
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A-like isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121796260
Membrane trafficking [BR:
sspl04131
]
Protein recycling
Others
EARP complex
121796260
Endosome - Golgi transport
Tethering complex
GARP complex
121796260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
121796260
NCBI-ProteinID:
XP_042050993
LinkDB
All DBs
Position
3:complement(43951316..43958843)
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AA seq
703 aa
AA seq
DB search
MTEVISDQFVEANNGSKNVVDLGFVVGELTLEDDAASDDDVALEGLEEELQDYKTDNVVT
MILSKGTSSRNYTKDVEHNLRRIELDSIQEYIKDSDNLISLHEQIHDCNTILLQMEKLLS
GFQAEIGSISSDIKVLQERSLDMGLKLKNRKAAESKLSKFVEDIIVPPRMIEIIVDGEVN
EEYLKTLEILSRKLQFVGSDAMLKTSKVITNVQPEVEKLHQKAVSKVFDFIIQKLNALRR
PKTNVQILQQSVLLKYKYVIMFLKEHNKEVFIDIRAAYIDTMNKVLGKNVQAYIHALEKL
QLDIATAADLIGVETRSTSLFLRGEPLKNRSAVFALGDRIKILKEIDEPALIPHIAEASS
KKYPYEVLFRSLHKLLMDTAASEYLFCDEFFREQPMFYDIFAGPFTVIDEHLNTVLPNFY
DAIGLMLMIRIIHQIQLIMSRKRLPCLDSHLDKVNISLWPRFKMVFDMHLSSLRNANIRT
LWEDDVRPHYVMRRYAEFTASLIQLNVDYGDCQLEHNLERLWLAADDLLVKLAALFQKPK
QQTVFVINNYDMTISVLKEAGPEEGRIHMHLEELLKSNTAIYVEELLQEHFSNLIKFVKT
RACEDPSLGPRRPISVAEVEPIVKDFASRWKAAIELMHSDVITSFSNFLCGMEILRATLT
QLLLYYTRLSDCMKNIPGGTAPNKDLISISSIMYEIRKFSRTF
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggtgatttcagatcaattcgttgaggcaaataatggatcgaaaaatgtggtg
gatttggggtttgttgttggcgaattgacactggaagatgatgcagccagtgatgatgat
gtggcactggaggggctggaggaagagctacaagattataaaactgataatgtagtcacc
atgatactgtcgaaaggcacatcttcgcgaaattacaccaaggatgtcgagcacaatcta
aggcggatagagctcgactctattcaggaatatatcaaagatagtgacaatctaatctca
cttcatgaacaaattcatgattgtaataccatcctattgcaaatggagaagcttttaagt
ggatttcaggctgagataggttcaataagttcagatataaaggttcttcaagaaagatct
ttggatatggggctaaagctgaagaatcgcaaggcagctgaatcaaaactgtctaaattt
gtcgaggacatcattgtgccaccaaggatgatagaaataatagtcgatggagaggtgaat
gaggaatacttgaaaacgcttgagattctaagtaggaagctacagtttgttggaagtgat
gccatgttgaagacttccaaagtgataactaatgttcagcctgaagttgagaagcttcac
caaaaagcagtttctaaggtatttgacttcatcattcagaagctaaacgcactgaggcgg
cccaagactaatgttcaaatccttcaacaaagtgttcttctgaaatacaaatatgtaata
atgtttctcaaggagcacaacaaagaggtatttattgacatccgtgctgcatacattgac
accatgaataaggttttaggtaaaaacgtccaagcttatattcatgccttagagaagttg
caactggacatagcaacagctgctgatttgatcggtgttgaaaccagaagtactagtcta
ttcttgagaggggaacctttaaagaaccgctctgctgtttttgctttgggagataggata
aagattcttaaggaaattgatgagcctgcattgattcctcatattgctgaagccagctct
aagaagtatccttatgaagttctattcaggagtttgcataagctgcttatggatactgct
gcttccgaatatcttttctgcgacgaattcttcagagaacagcctatgttttatgacata
tttgcaggcccctttacagtaattgacgaacacctgaatacagttctaccaaatttttat
gatgcaattggtctgatgctcatgattcgcattatacaccagattcagcttataatgtct
cggaagcggctaccgtgtctagattcgcacttggataaggttaacatctctctgtggccg
cgatttaagatggtatttgacatgcacctcagcagcctacgcaatgccaatatccggaca
ttgtgggaagacgatgttcgtccacattatgtcatgagacgctatgcagaattcactgca
tctctaattcagcttaatgttgactatggagactgccagcttgaacacaacttggaaaga
ctgtggctggctgcagatgatttgcttgtcaagcttgctgcattgttccagaaacccaag
caacagaccgtgttcgtcataaataactacgacatgacaatttctgtactcaaggaagct
ggtcccgaggagggtagaatccatatgcacctcgaagagctgctcaagagcaatacggcc
atttatgtggaggagctactacaggaacacttcagcaacctgatcaagtttgtcaaaacc
agagcctgtgaggacccgagcttgggtccgaggcgcccaatcagcgtggcagaggtcgag
cctatagtaaaggacttcgcgagcagatggaaagccgcgatagagctaatgcacagcgac
gtcattacgtctttcagcaacttcttgtgtggtatggagattctcagagctacattgact
cagctattgctttactacacaaggctctcagattgcatgaagaacattcctggtggtact
gctccaaacaaagatttgatttctatatcatcaattatgtatgaaattaggaaattttca
agaacattttaa
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