Salvia splendens (scarlet sage): 121797207
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Entry
121797207 CDS
T07627
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
121797207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121797207
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
121797207
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
CDI
Motif
Other DBs
NCBI-GeneID:
121797207
NCBI-ProteinID:
XP_042051888
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All DBs
Position
3:complement(17148305..17151182)
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AA seq
652 aa
AA seq
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MADEREKAAALIERTVDSTAAEVDPRLLKAIKFVVRNSDSELRCASQTLMSLMKRNHSQV
RYLALFIVDELFMRSKLFRSLLVENLDLFLSLSIGFRRNHPLPPPASIASLLRSKAIEFL
EKWNDSFGIHYRQLRLGYDYLKNTLRFQFPNLQANAARIQQERREREMRTRDILLKKFES
LKANFSSIKVEIQANIDEIDECLGILRMKDDDMQFDPVDNEEMEEFYNSELHQIRLDSLR
EAKKVQVDSENEVVIDALREFYKVLVTKHLAVVQEWISVLIRVEVADLSFRDSALKNLID
IRNLIQSTKRECEESGCELRKIANAEEEVIWEEGTVEQFDKGEAGPSCSKTPEAPSTSTA
NSTRDVKRAKKLSNVTENRNAWNSESNKDPVRSELLAEAPVLNWGSFLDRWGPNEDVMAN
QRGLDVEGHWGRVDQDAVIPAEKIAELSMRASVYEEKPLKIQPCRAPLKNGALCQRKDFR
VCPFHGPIIPRDDEGNSIKESSSTDEAVDQNQLEESSPNADSNVVHQLLKTAVQNVRERD
KEDAKKRELDKRALKRAKLAEVREHNEAMLRDAAIASTSRSYYVGEDRERSNGSRTSSRR
KKQTLASMLKKKETSKDRLAQRLLNTNARDATIRQLTTAEEANYREAFPNQW
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgagagggagaaggcggcggcgttgatagagagaaccgttgactctacggcg
gcggaggtggatccgcgcctcctcaaggcgatcaaattcgtggtgcgtaattccgactcg
gagctccgttgcgcctcccaaaccctaatgtctctcatgaagcgcaaccattctcaggta
cggtatcttgcacttttcatagtagatgagcttttcatgcgctcaaagcttttcagaagt
cttcttgttgagaacctggatctattccttagcttaagtattggttttagaagaaaccat
ccgcttcctcctcctgcctctattgcatctcttcttcgctcaaaggcaatcgagttctta
gagaagtggaatgattcgtttggaattcattatcgacaactcagattaggttacgactat
ctcaagaatacccttcgtttccagtttcctaaccttcaggctaatgcagcccgcatacaa
caagagagaagggagagggaaatgagaacaagagatatcttactgaagaaatttgaatct
ttgaaagcaaatttctcatcaataaaagtggagatacaggccaatattgatgaaattgac
gagtgtctaggaattcttaggatgaaggatgatgacatgcagtttgatcctgtagataat
gaagaaatggaagagttttataactccgaactacatcagatccgtcttgattctttgaga
gaggcgaaaaaagtccaagtggacagtgaaaatgaagttgttattgatgctctgagggaa
ttctacaaggttctagtcactaagcatctcgctgtagtgcaggagtggatttctgttctt
ataagagtggaagtggccgatctcagtttcagggattctgctttgaaaaatctcatagat
ataagaaatctcattcaatcaacaaaaagagaatgtgaagaatccggatgtgagcttcgt
aaaattgcaaatgctgaagaagaagttatttgggaagaaggcactgtagaacaatttgac
aaaggagaagcaggtccaagctgctctaaaactcccgaagcacccagtacatcaacagct
aatagtacaagagatgtaaaacgagctaaaaaattgtcgaatgtaactgagaacagaaat
gcttggaatagtgaaagtaacaaagatcctgtacgaagtgagcttttggctgaagctcca
gttcttaactggggatctttcttggaccgctggggaccaaatgaggatgttatggctaac
caaaggggactggatgttgaaggtcactggggtagggtcgaccaggatgcagttataccg
gccgagaaaattgcagaactgagcatgcgggcatctgtgtacgaagaaaagcctctcaaa
attcaaccgtgtagagctcctttgaagaatggtgcactttgtcaaagaaaagatttcaga
gtttgcccatttcatggacccatcatccctagagacgatgaaggaaattcaattaaggag
agctcctcaacagatgaggcagttgaccaaaaccaactagaagaatcaagtccaaatgct
gacagtaatgtggtgcaccagctattaaagacagctgtacagaatgttcgggagagggac
aaagaagatgcaaaaaagagagaattagacaagcgggccttaaagagagcaaagcttgca
gaagttcgggaacacaacgaagctatgctgcgagatgcagcaattgcttcaacttcaaga
tcctattatgtaggtgaagacagggaaagaagtaatggatccagaacttctagtagaaga
aagaaacaaacgctggcatcaatgctgaaaaagaaagaaacttcaaaagacagattggct
cagaggttactgaacactaatgcaagagatgctactatccgacagttgacaacggctgaa
gaagcaaactaccgggaagcatttccaaaccaatggtag
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