KEGG   Salvia splendens (scarlet sage): 121797655
Entry
121797655         CDS       T07627                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    121797655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sspl03019]
    121797655
Messenger RNA biogenesis [BR:sspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     121797655
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     121797655
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 121797655
NCBI-ProteinID: XP_042052230
LinkDB
Position
4:complement(698852..700849)
AA seq 128 aa
MSWAGPEDVFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGAWERVIVGGL
YCDIPLGLYIIRGENVVLIGELDLDKEELPSHMTRVSSEEIKRAQKAEREASELKGMMNK
RMDFLDMD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcgtgggctggccctgaagatgtctttctctcgacttctcttgctagctatcttgac
aagaaacttcttgtattacttcgagatggcaggaaactattagggatccttcgttccttt
gaccagtttgccaatgctgtcctagagggcgcgtgggagcgtgttattgtaggcggactt
tattgcgatatcccattgggtctgtacataatccgtggagaaaacgttgtcttaatcggg
gaactggacttggacaaagaggagcttccgtctcacatgacccgcgtttcatcggaagaa
ataaagagggcgcagaaggcagaaagagaagcttcggagctcaagggtatgatgaacaag
aggatggacttcctcgatatggattga

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