Salvia splendens (scarlet sage): 121797843
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Entry
121797843 CDS
T07627
Name
(RefSeq) coatomer subunit beta'-2-like
KO
K17302
coatomer subunit beta'
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121797843
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121797843
Membrane trafficking [BR:
sspl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121797843
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121797843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_Nup120_160
WD_LRWD1
TPR_1
HEAT_GCN1
Clathrin
TPR_CcmH_CycH
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
121797843
NCBI-ProteinID:
XP_042052525
LinkDB
All DBs
Position
4:complement(2095891..2105499)
Genome browser
AA seq
914 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQIMVKSFEVTELPV
RSAKFIPRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLVTGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVSYLRGSRRVVIGYDEGTIMVKLG
REVPVASMDNSGKIIWSKHNEIQTVNIKSVGADYDVADGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNKSFGSALEFVWSTEGEYAVRESTSRIKIYTKNFQ
EKKSIRPTFSAEHIYGGILLAICSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAI
ASDTSFYILKYNRDIVSAHLDSGRSVDEQGVEDAFELLYEINERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVFLIDKEFNVIGYTLLLSLIEYKTLVM
RGDLERANKVLQSIPKEHQNSVAHFLESRGMIEDALEVATDPDYRFELAIQLGKLDIAKE
IATDAQSEAKWKQLGELAMSSGMLEMAEECLKQASDLSGLLLLYSSLGNAEGISELASLA
KEHGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLNK
INQKAAESLADPEEYPNMFEDWQVALAVEAKAAETRGNLPPAAEYMQHADRSTASLVEIF
RTMQIEEDEHLENGGLDYEDGKTNGELSQEQDGHDESHEEAVVVDADPTDGAVLVNGNEA
EEELGVNDDEKPSA
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcagactagaaatcaagaggaaacttgcgcaaagatcagaaagagtaaagtct
gtggatctacatccaacagagccatggatattggcgagtctgtattcggggactgtttgc
atctggaattatcagacccagataatggttaaatcttttgaggttactgagcttccagtt
agatctgctaagtttataccacgaaagcagtgggtggttgctggtgctgacgacatgttc
attcgtgtctacaattacaatacgatggataaggttaaagtatttgaggcccacactgat
tatatcaggtgtgtggcagttcaccccactctcccctatgtgttgtcatcatcagatgac
atgctcataaagctctgggactgggaaaaggggtgggcatgcactcaaatatttgagggt
cactcccactacgtaatgcaagtgacttttaatcccaaagatactaatacttttgctagt
gcatcactcgatcgcacaattaagatttggaaccttggctcccctgatccaaattttacc
cttgatgctcatctgaaaggggtaaactgtgttgattattttactggtggtgataaacct
tatttagtcactggctctgatgatcacactgctaaggtgtgggattatcagacaaagagc
tgtgtccagacactagaaggacacacacataatgtttcagcagtttgtttccaccctgaa
cttcccattataataacaggttctgaggatggtacagttcgcatatggcattccaccact
tatagacttgaaaacacattgaattatggacttgaaagagtttgggcagttagttacttg
agaggatcacgacgggttgtaattggctatgatgaaggaaccataatggtaaagcttggt
agagaggtgcctgttgcaagcatggacaatagtgggaaaatcatatggtctaagcataat
gagatccagacagtcaacattaagagtgttggggccgattatgatgttgctgacggagag
agattgcctttagctgtgaaggagttgggaacctgtgacctttatccacagagtttgaag
cacaatcctaatggtaggtttgttgttgtatgcggggatggtgagtacatcatatacaca
gctttggcatggagaaacaaatcctttggatcggctttggaatttgtttggtcaacggaa
ggagaatatgctgttagggaaagtacatcaaggattaagatctacactaaaaatttccag
gaaaagaaaagcatccgccctacattttcggctgagcacatctatggtggcatattattg
gcaatatgctcaaatgattttatttgtttctatgattgggctgaatgtaggttgatacgg
cgaattgatgtcaatgttaagaatctttactgggctgatagtggggatttggtggccatt
gccagtgatacgtcattctacatacttaagtataatcgggatattgtttctgcccatctg
gatagtgggcgatcagtagatgaacaaggggtggaagatgcttttgagcttctttatgaa
attaatgaaagagtacgaactggtctctgggttggggactgttttatctacaataactcg
tcttggaggcttaattactgtgtcggtggtgaggtgacaactatgtttcatttagaccgg
cctatgtacctgcttgggtatcttgctaatcagagtcgtgtttttctcatcgacaaagaa
tttaatgttattggatataccttgctgctcagcttgattgagtacaagactcttgtgatg
aggggtgatctggagagggcaaataaggtcctgcaatcaattccaaaggagcatcagaac
agtgtggcccatttcttggaatcacgagggatgatagaagatgcacttgaagtcgctact
gatcccgactacagatttgagttagccatacagctaggaaagctagacattgcaaaggaa
atagcaacagatgcacaaagtgaggctaaatggaagcaattgggtgaattagccatgtct
agcggaatgttggagatggcagaagagtgtctgaagcaagctagtgacctgagtggttta
ttgctactctattcatctttaggaaatgccgaggggattagtgaacttgcctctcttgca
aaagagcatggtaaaaacaatgttgcattcctttgtctgtttatgttgggtaaattggag
gactgcctacaattgttggtagagagcaatcggataccagaagctgcattgatggctcgg
tcttaccttccaagtaaggtgtcagaaattgttgctctttggagaaaggacctcaacaag
attaatcagaaagctgcagagtcacttgctgatcctgaagaatatccaaatatgtttgag
gattggcaagtagcacttgctgttgaagctaaagctgctgagacaaggggtaatttgcct
ccagcagctgaatacatgcaacatgctgatagatcaacagcaagtcttgtagaaatcttc
agaaccatgcaaatcgaagaagatgagcacctagaaaatggtggcttggattatgaggat
ggaaagacaaatggtgaattgtcacaagagcaggatgggcatgatgagagtcatgaagag
gctgttgtggtggatgctgaccctacagatggtgctgtgctcgtcaacggaaatgaggca
gaggaagagttgggagtgaatgatgatgaaaaaccgtcagcctaa
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