Salvia splendens (scarlet sage): 121797921
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Entry
121797921 CDS
T07627
Name
(RefSeq) nuclear pore complex protein NUP96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121797921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121797921
03036 Chromosome and associated proteins [BR:
sspl03036
]
121797921
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121797921
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121797921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
WSN
Motif
Other DBs
NCBI-GeneID:
121797921
NCBI-ProteinID:
XP_042052635
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All DBs
Position
4:3409053..3414777
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AA seq
1045 aa
AA seq
DB search
MEVNLAVLKPTSIHESQYKRRRVSLNGSDTSLSCQVLHDAKNSLPTLRCSDYYTKPCLSE
LAIRELSNPGYCSRVEDFVIGRIGYGCVKFIGETDVRRLDLDSIVKFRNCEIVIYEDDSS
KPLVGHGLNKPAEVTLLVQTKPLSNLNEAQLAKIVEKLKCKTESQGAQFISFNPDNREWK
FLVQHFSRFGLVDEDEDEDDVPMDDVSPGAQDPEDMNGDEVSDDEDNGSPDMSLLSHSLP
AHLGLDPVRMQDMRMLWFPAKEDEVEALTSRHPYENPPIAKDSSRSPLHHSSRKTVHNSN
TPSFRKTPLALKEFNPGGFSSTSSGAILLSQQNKGLHLTTRKSEGFELELTKKTPVTGSH
SCNIVDAALFMGRSFRVGWGPNGILVHSGMPVGSENSRAVLSSVINIEKVALDKVTRDDS
NRVKEELTDFCFSSPLNIHKDLSRETKKVELGTFSLKLQKLICDRLTLPDICRSYIDIIE
KQLEVPSLSSDTRVLLMHQVLVWELIKVLFSTRKMGGQLKLIEEDEEDMIPDVRESYPDV
DQEALPLIRRAAFSYWLQESVHHRVQEDISSLYELSGLEHIFLLLSGRQMDAAVELAASR
GDVRLSCLLSQAGGSTTNRADIAHQLDLWRKNGLDFSFIEDDRVRLLELLAGNIHRALHG
VKIDWKRFLGLLMWYKLPPDISLPVVFNTYQKLLNEGDAPYPVPVYIDEGPIEDVSKWIL
NNRFDLAYYLMLLHAREENDFGALKTMFSASASSYDPLDYHMIWHQRAVLEAIGTFSSND
LHVLDMAYVSQLLCLGQCHWAIYVVLHMPHREDYPYLQATVIREILFQYCEVWSTSDSQW
KFIESLGIPLAWLHEALAIFHSYTGDLPKALGHYLACANWQKAHSIFLTSVAPSLFLSAK
HAEIWELATSMEDYKSEIEDWDLGGGIYISFYILKNSMQEDNSTMTELDTLEKKNDACAD
FISRLNKSLAVRANKLSVEARVVFSKMAEEISSLLLSDSGEGSTGEDQLICFETVFRAPM
PEDLRSYHLQDAVSLFTCHLSELAQ
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggaagttaatttagctgtgctaaagcctacttcgattcatgagtctcagtacaaaaga
agaagagtttctttaaatggttcagatacttctctctcctgtcaggtcttacatgatgct
aaaaattcattaccaaccctccgttgttctgattactacacaaaaccatgcttaagtgag
ttggctattcgtgagctctcaaaccctggttattgcagtagagttgaagattttgtcatt
ggaagaattggttatggatgtgttaagtttatcggggaaacagatgttagacgcttggat
ttggactccattgtcaagttcagaaactgcgagattgttatatacgaagatgacagttct
aagccgttggttgggcatggtcttaacaagccagctgaagtaactctactagttcaaaca
aagccattgagtaatctaaatgaggcgcagttagcaaaaattgtggaaaaattgaagtgc
aagacagaaagtcaaggggcacaattcatttcatttaatcccgataaccgtgaatggaaa
tttttggtacaacattttagcagatttggcctggttgatgaagatgaagatgaagatgat
gttccaatggatgatgtgtcccctggagctcaagatcctgaagatatgaatggtgatgag
gtatcagatgatgaggacaatggttcaccagacatgagtcttctttcacattctcttcct
gctcatcttggtcttgatcctgtcagaatgcaagacatgaggatgttgtggtttcctgcc
aaggaagatgaggtagaggctcttactagcaggcatccatatgaaaatccacctattgct
aaagattcctcaagatctcctttgcatcattcatcgaggaagacagttcacaattcaaat
accccttcctttcgcaagactccattagctttaaaagagtttaaccctggtggttttagc
tctacttcctctggagccattttattgtcccaacaaaataaaggtttgcatctaaccacg
agaaaatctgaaggcttcgagctggagcttacaaagaaaacaccagtaactggcagtcat
tcttgtaatatagttgatgcagcactatttatgggaagatcctttcgagtaggttggggc
ccaaatggcatacttgtgcattctggtatgcctgttggtagtgaaaattcccgagctgta
ttatcctctgtgataaatattgaaaaggttgcacttgacaaagtgacaagagatgacagc
aacagagttaaggaggaacttactgacttttgtttcagctcccccctcaatattcacaag
gatttgagtcgtgaaacaaaaaaagttgaactaggaacctttagtctcaaacttcaaaag
ctcatttgcgaccgcttgactcttccagatatttgtcggagttatatagacataattgag
aagcaactagaggttccaagcttatcatctgatactcgtgtcctactgatgcaccaagtg
ttggtttgggaattaattaaagttctcttttcaacaaggaaaatgggtgggcaactgaag
ctcattgaagaggatgaggaggatatgattccagatgtgagggaaagttatccagatgtt
gaccaggaagcacttccacttattagaagagctgctttcagctattggctgcaagagagc
gttcaccaccgtgtacaagaagatatcagttcgctatatgagctgagtggtctagaacac
atatttttgcttctttctggaagacagatggatgctgctgtagagcttgctgcttctaga
ggggatgtacgactatcttgtctcttaagccaggctggtgggtccacaaccaatcgtgct
gatattgctcatcagcttgatctttggagaaagaatggactggattttagttttatcgag
gatgatagggtgaggcttcttgaattgctcgctggcaacattcatagggccttacatggt
gtaaaaattgactggaaaaggttcctaggactgttgatgtggtataaacttccacccgac
atttcattacctgttgtttttaacacttaccagaagcttctgaatgagggagatgctcca
taccctgttccagtttacatagatgaaggacctatagaagatgtgagcaaatggattttg
aataaccgttttgacctagcttattatcttatgcttcttcacgcccgagaagaaaatgat
tttggtgctttaaagaccatgttcagtgcctccgcttcatcatatgaccctcttgactat
cacatgatttggcatcagcgtgcagttttagaggccattggcacttttagttctaatgat
ctacatgtccttgacatggcatatgtttctcagttgctctgccttgggcaatgtcattgg
gccatctatgtggtacttcatatgcctcaccgtgaagattatccttatcttcaagctaca
gttatcagggaaatcctctttcaatattgtgaagtttggagtactagtgactcacaatgg
aaattcattgaaagtctaggcattcctttagcatggttgcatgaagctttggcaatattt
cacagttacactggggaccttccaaaggctctaggtcactatcttgcatgtgcaaactgg
cagaaagcacactctattttcttaacttcagttgctccgtctttgtttttgtcagcaaag
catgcagaaatatgggagctagcaacatccatggaggactacaagtcggagattgaagat
tgggaccttgggggaggaatttatatttcattctatatattgaagaattccatgcaggaa
gacaatagcaccatgactgaactggacactcttgagaagaagaatgatgcatgtgctgac
tttattagccgtttgaacaagtctctggcagttcgggcaaataaattatcagttgaagca
agagtcgtgttctcaaagatggcagaagagatctccagtctgcttctttctgatagcggc
gagggttcgacaggcgaggatcagctgatctgcttcgaaactgtttttagggcacccatg
ccggaagacctccgctcatatcatttacaggatgctgtttcacttttcacttgtcatctt
tctgaactagcacaataa
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integrated database retrieval system
