Salvia splendens (scarlet sage): 121797926
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Entry
121797926 CDS
T07627
Name
(RefSeq) coatomer subunit beta'-1-like
KO
K17302
coatomer subunit beta'
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121797926
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121797926
Membrane trafficking [BR:
sspl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121797926
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121797926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
HEAT_GCN1
TPR_1
MAGUK_N_PEST
Motif
Other DBs
NCBI-GeneID:
121797926
NCBI-ProteinID:
XP_042052641
LinkDB
All DBs
Position
4:3475226..3483940
Genome browser
AA seq
911 aa
AA seq
DB search
MPLRLEIKRKLVQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQIMVKSFEATDLPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVTVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWLCTQIFEGHSHYIMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIVTGSEDGTVRIWHATTYRLENTLNYGLERVWAVGYIKGSRRVVIGYDEGTIMVKLG
REVPVASMDNGGKIIWAKHNEIQTVNIKAVGADNEVADGERLPLAVKELGNCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSTEGEYAVRESTSKIKIFSKNFQ
EKKSIRPTFSAEHIYGGNLLAMCSNDFICFYDWADCRMIRRIDVTVKNLYWADSGDLVTI
ASDTSFYILKYNRDVVSAHLDSGRSVDEQGVEDAFELVYEINERLRTGLWVGDCFIYNNS
SWRLNYCVVGEVTTMFHLDRPMYLLGYLANQSRVYLLDKEFNVIGYTLLLSLIEYKTLVM
RGDLERANEVLPSIPKEHLDSVARFLESRGMIEDALEVATDPDYRFELAIQLGKLAIAKE
IATVAQSESKWKQLGELALSTGMLEMAEECLKQANDMSGLLLLYSSLGNAEGISALASLA
KEHGKNNVSFLCLFMLGKLEDCLQLLIDSNRIPEAALMARSYLPSKVSEIVSLWRKDLSK
INQKAAESLADPEEYPNMFDDWQIAFAVEAKAAETRGKYPPASEYVQNVDRSTASLVETF
RSMQMEEEEDLDYEYAEQNGHEAQETQHDELVEGRDDGQEEPVVVDADSTDGAVLVNGNE
AEEEWVLTPRH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcagattggaaatcaagaggaaactcgtacaacgatcagaaagagtaaaatca
gtggatctgcatccaacagagccatggatattggcaagtttgtattcagggactgtttgt
atttggaattaccagactcagataatggttaaatcttttgaggctacagatttaccagtt
agatcggcaaaatttatcgcacgaaagcagtgggttgttgctggtgctgatgatatgttc
attcgcgtgtacaattacaatacaatggataaggtaacagtgtttgaggcacatacagat
tatatcaggtgtgtggctgttcatcccactcttccctacgtgctgtcatcctctgatgat
atgctaataaagctttgggactgggagaagggatggctgtgcactcaaatttttgagggc
cattctcactatattatgcaagtgacttttaatccaaaagataccaatacttttgccagt
gcttcacttgaccgcactattaagatctggaatcttggctctcctgatccaaactttacc
ttggatgctcacctgaaaggagtcaattgtgttgattatttcacgggtggtgataaacca
tatctcattactggttctgatgatcacactgctaaggtgtgggattaccagacaaagagc
tgtgtgcagacattagaaggccacacacacaatgtgtctgcagtttgcttccatcctgaa
cttcccattatcgtaactggttctgaggatggtactgtccgcatttggcatgcaaccact
tacagacttgaaaacacattgaattatggccttgaaagagtttgggcagttggctacatt
aaaggttcaagaagggtcgtaatcggttatgatgaaggcacgatcatggtaaagcttggt
cgtgaggtacctgttgctagtatggacaatggagggaaaataatttgggccaagcataat
gaaattcagactgtcaacatcaaggctgttggggcagataatgaggttgctgatggagag
agactacccttggcagttaaggaactgggaaattgtgatctttatccacagagcttaaag
cacaatcccaatggtaggtttgttgttgtatgtggagatggtgaatacataatatacaca
gctttggcatggagaaacagatcatttggctcggcattggaatttgtttggtcaactgaa
ggagaatatgctgttagagaaagcacatctaagattaagattttctccaaaaatttccag
gagaagaaaagcatccggcccactttttctgccgagcatatatatgggggcaatttattg
gcaatgtgttcaaatgattttatttgtttctatgattgggctgattgcaggatgatacgg
agaatcgatgtcactgttaaaaatctctactgggctgacagcggtgatttggtgaccatt
gccagtgatacatcattctacatacttaaatacaaccgtgatgttgtttctgctcatcta
gatagtggaagatcagtagatgaacaaggcgttgaagatgcttttgagcttgtttacgaa
attaatgaaagattacgaactggactttgggttggggattgttttatttacaataactct
tcctggagactcaattactgcgtggtcggtgaggtgacaacaatgtttcatttagaccga
ccaatgtacctgcttgggtatcttgctaatcaaagtcgtgtttatctccttgacaaagaa
tttaatgttattggatacacattgctactcagcttgattgaatacaagactcttgtaatg
cgtggtgacttggaaagggcaaatgaggtcttaccatcaattccaaaggaacatctcgac
agtgtcgctcgtttcttggaatcacgaggtatgatagaagacgcacttgaagttgctaca
gatcctgattatagatttgagttggccatacaactaggaaaactagcaattgctaaggaa
attgcaacagtagcacagagcgagtctaagtggaagcaattgggtgaattagccttgtct
actggaatgttggagatggcagaggagtgcttgaagcaagcaaatgacatgagtggtttg
ttgctactctactcctccttaggcaatgctgagggaatttctgcacttgcttctcttgcc
aaagaacatgggaaaaataatgtttcattcctttgtttatttatgttgggtaaattggag
gactgccttcagctgttgattgatagcaatcggatacctgaggctgcattgatggcacgg
tcatacctcccaagtaaagtgtcagagattgtttctctttggagaaaggacctcagcaag
attaatcagaaagctgccgagtctcttgctgatccggaagagtatcctaatatgtttgat
gattggcaaattgcttttgctgttgaagccaaagctgcagagacaaggggcaaatatcct
ccagcatctgaatatgtgcagaatgttgatagatcaaccgcaagtcttgtagaaactttt
agaagcatgcaaatggaagaagaagaagatttggattacgagtatgctgagcagaatgga
catgaagcacaagaaacacaacatgacgaacttgtagaagggcgtgacgatggccaggaa
gagcctgttgtggtggatgctgactcaactgatggtgctgtacttgttaacggaaatgag
gccgaggaagagtgggtgcttacgcctcgtcactaa
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