Salvia splendens (scarlet sage): 121797997
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Entry
121797997 CDS
T07627
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121797997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121797997
03110 Chaperones and folding catalysts [BR:
sspl03110
]
121797997
03029 Mitochondrial biogenesis [BR:
sspl03029
]
121797997
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121797997
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
121797997
Messenger RNA biogenesis [BR:
sspl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
121797997
Chaperones and folding catalysts [BR:
sspl03110
]
Heat shock proteins
HSP60 / Chaperonin
121797997
Mitochondrial biogenesis [BR:
sspl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
121797997
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121797997
Exosomal proteins of other body fluids (saliva and urine)
121797997
Exosomal proteins of breast cancer cells
121797997
Exosomal proteins of colorectal cancer cells
121797997
Exosomal proteins of bladder cancer cells
121797997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Wtap
DUF7621
Motif
Other DBs
NCBI-GeneID:
121797997
NCBI-ProteinID:
XP_042052739
LinkDB
All DBs
Position
4:complement(4382614..4385882)
Genome browser
AA seq
588 aa
AA seq
DB search
MGCSFKPLPAAFTNQPLLTKIAKKPSISSALNAKPPKKDLYFNHDGSATQKLLAGVNKVA
ELIGVTMGPKGRNVVLQNKYGPPKIVNDGETVLKQIELDDPLENVGVKLVRQAGARTNAL
AGDGCTTSIVLARGLIAEGVKVVAAGLNPVRVSRGIEKTARALVAELKLLSKEVEDHELA
HVAAVSAGNDYAVGDMIADALRQVGREGVVTIEKGNYAESKLEIVEGMQFDRGYMSPYFV
TDRRKRIVEFHDCKLLLVDKKITHPKELFKILDNAVKEKYPILIVAEGIEQEALTPVIRN
KLRGVLKAAAIKAPAFGERKSHCLDDLAVLTGGTVIRDEMGFTLENARVDMLGSASKVTI
TKDSTLIVTDGATNEALKERVRQLQRLVENTSEEFQKKILKERIARLSGSIALLQVGAKT
VVELKDKQLRVEDAVNATKAAVEEGVVVGGGCCLLRLSTKIDKIREQLDNEEQKIGADIF
KKALSYPARQIAKNAGVNGNTVINKVLSSDDVRFGYNAASNTYEDLMAAGILDPSKVVRC
CLENAASVAKAFLIADAVVVEIKEPFTPRMMTKPKPMPTSGVGPFSQD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgggatgttcattcaagccattgcctgctgccttcaccaaccaaccactgctcactaaa
attgccaagaaaccttcaatttcctctgccttgaatgccaaaccgccaaaaaaggatttg
tacttcaaccatgatggttctgccactcaaaaactattggcaggggttaataaggttgca
gagcttattggagtgacaatggggcctaaggggaggaatgtggtgttgcagaacaaatat
ggacctcccaagattgtcaacgatggtgaaactgtgcttaaacagattgagctggatgat
cctctagaaaatgttggagtgaaactggtgaggcaagctggcgctagaacgaatgctctt
gctggtgatggttgcacgacgtccatagttctagcgcgaggcctcattgcagagggtgtt
aaggtcgttgcagccggcttgaatccggttcgggtttcacgagggattgagaaaacagca
agagcccttgttgctgaactcaaattgttgtctaaagaggttgaggaccatgaacttgca
catgttgctgctgtgagtgctgggaatgactacgctgtcggagacatgattgctgatgct
cttcgccaagtaggacgagagggtgttgtcaccattgagaaagggaactatgcggagagc
aagctagagatagtcgaagggatgcaatttgatcgtggctacatgtctccttattttgtc
actgatcgacggaagaggatagtggagtttcatgattgcaaattgctgttagtagacaag
aagatcacacatccaaaggagctgttcaagattcttgacaatgcagtgaaggaaaagtac
ccgattctcattgttgcagaggggatcgagcaggaagctctgactccggtcatcaggaac
aaactgagaggggtgctcaaggcagcagccatcaaagctcctgcctttggcgagcgcaag
agccactgcttggatgaccttgctgtcttaaccggaggcactgtgatcagagacgagatg
gggttcacgcttgaaaatgcacgcgtagatatgctgggatctgcttcaaaagtcacaatt
actaaggattcaaccttgatagtgactgatggagctactaatgaagccctgaaggaaaga
gtaaggcagctgcagcggctcgtggagaacactagtgaagagtttcaaaagaagattttg
aaggaacgaatagcccgattatcaggcagcatagcactgcttcaggtcggagcaaaaaca
gtcgttgagttgaaggacaaacagctgagagttgaagatgcagtgaatgcaacaaaggcc
gcggttgaggaaggcgtagtcgttggtggtggctgctgcctattaaggctgtccacaaag
attgataaaatcagagagcaattagacaatgaagagcaaaagattggagctgacattttc
aagaaagcattgtcttatcctgcaagacagattgccaaaaacgccggtgtaaacggaaac
actgtcatcaacaaggttctatcgtcggatgatgtgagattcgggtacaatgctgcaagc
aacacgtacgaagatctcatggctgccggcatcctagacccttcaaaggttgttaggtgt
tgcttagagaatgctgcatcggttgcaaaggcgttcttgatagctgatgcggttgttgtt
gaaatcaaagagccatttacgccgagaatgatgacaaaaccaaaaccaatgccaacttca
ggtgttggaccctttagccaagattaa
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