Salvia splendens (scarlet sage): 121798269
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Entry
121798269 CDS
T07627
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121798269
03036 Chromosome and associated proteins [BR:
sspl03036
]
121798269
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121798269
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Helicases
121798269
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121798269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121798269
NCBI-ProteinID:
XP_042053120
LinkDB
All DBs
Position
4:7355335..7360228
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AA seq
703 aa
AA seq
DB search
MPSVVMADAEAQFADEKKMTKKSQLAEEMEVEEKSAEKKTKKEKKSSKKTKLTPETAPDD
SNSKSPVKIKKEKKRKALEIDNEEEKSDTSSEMGEPVNGSTKKKMKFEDGHGEEEEKEDN
PNSVSNFRISAPLRETLKAKGIEALFPIQAMTFDTILDGSDMIGRARTGQGKTLAFVLPI
LESLTNGRAKALRKTGYGKAPSVLVLLPTRELATQVAADFEVYGGALGLTCCCLYGGSPY
PPQQNQLKRGVDIIVGTPGRIKDHIERGNIDFRSLQFRVLDEADEMLRMGFVDDVELILG
KVEDSSKVQTLLFSATLPVWVKQISTKFLKPDKQTADLVGNAKMKASTNVRHFVLPCSVS
ARAQLIPDIIRCYSSGGRTIIFTETKDSASTLAGVLPGARALHGDIQQSTREVTLNAFRS
GKFSTLVATNVAARGLDIDDVQLIIQCEPPRDVEAYIHRSGRTGRAGKSGVAVMLYDPRM
SNFSRIERESGVKFERISAPQPSDIAKSAGVEAAEKINEISDSVIPVFKAAAEDLLNSSD
LTPVDLLAKALANAAGYTEIKNRSLLTSLENHVTVLLECGKPIYSPSFAYGALRRFLPEE
KVESIKGLSLTADGKGAVFDVAVEDLDAFLAGQENAAGVSLEVVTLLPNLQEREPSRGRF
GGGGGGRGFGDRRGARFGGGRGGGGRGSFSRGRGGGGNRNSRW
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgttgttatggctgatgctgaggctcaattcgccgacgagaagaagatgacg
aagaagtcccagctcgcggaggagatggaggtggaggagaagtcagctgagaaaaagacg
aaaaaggagaaaaagtctagcaaaaagaccaaattgaccccggaaactgcccccgatgat
tctaattccaagagccctgtcaaaattaagaaagaaaagaaacgcaaggctttggaaatc
gataatgaggaggagaaaagcgacaccagctccgagatgggtgagcctgtgaacggctcc
accaagaagaagatgaaatttgaggacggacatggagaggaggaggaaaaagaggacaac
cccaactccgtctccaatttccgaatttcggcgccgcttagggagactttgaaggccaag
ggaattgaggcgctgttcccgattcaggcaatgacatttgacaccattctcgatggttcc
gatatgattggaagggctcgcactggtcagggtaagactttggcatttgtattacctata
ttggaatcattgaccaatggacgtgctaaagctttgaggaagactggatatgggaaggcg
ccaagtgtccttgttctcttacccacaagggagttggccacacaggtggctgctgacttt
gaagtttatggtggagctctagggttgacttgctgttgcctgtatgggggctctccttat
ccgccacagcagaatcaattgaaaagaggcgtggatattattgttggaacccctggccgc
atcaaggatcacatagagcgaggaaatattgacttccggtccttacagttccgagtgctt
gatgaggctgatgaaatgctgaggatgggttttgttgacgacgttgaacttattcttggc
aaggttgaggattctagcaaagttcagacactgcttttcagtgctacattgccagtttgg
gttaagcaaatatctaccaaatttttgaaaccagacaagcaaactgctgaccttgttggt
aatgcgaaaatgaaagccagcaccaatgtaaggcattttgtccttccctgctctgtatct
gccagagctcagctaattcctgacatcattcgttgctatagcagtggaggacgcactatt
attttcacagagactaaggattctgcttccacacttgctggtgtgcttcctggagcacgg
gcattgcatggtgatatacaacagtctacccgtgaggtaactcttaatgccttcagatca
ggcaaattttctacacttgtggctaccaatgttgctgcacgaggactagacattgatgat
gtccagttaattattcagtgtgaaccacctcgtgatgtggaggcatacattcatcgatct
gggagaacaggaagagctgggaaaagtggcgttgctgtgatgctttatgatcctagaatg
tcaaatttttctaggatcgaaagagaatcaggtgttaaatttgaacgtataagtgctccg
cagccatctgatattgctaaatctgctggtgttgaagcagcagaaaaaatcaatgagatt
tctgatagtgtgattccggtattcaaagctgcagctgaagacttgctcaactcatctgat
ttaactccagtagacctacttgctaaggcattggccaatgctgctggttacactgaaatt
aagaatcggtcacttctcacctcattggaaaatcatgttactgtactgcttgagtgtgga
aagcccatctactcaccatcgtttgcttatggagctctgaggaggtttttgcctgaggag
aaggttgaatctataaagggtctttcattaactgcagatgggaagggtgctgtatttgac
gttgctgtcgaagatcttgatgctttccttgcagggcaagagaatgctgctggtgtgagc
ttggaagtggtgacattgttgccaaatttgcaggaaagagagccatcaagaggaagattt
ggtggtggtggtggtggccgtggcttcggggataggagaggtgccagatttggtggtgga
agaggagggggtggtagaggatccttttctagaggtcgtggtggtggtggcaataggaac
agcagatggtaa
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