KEGG   Salvia splendens (scarlet sage): 121798546
Entry
121798546         CDS       T07627                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03010  Ribosome
sspl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    121798546
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121798546
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sspl03011]
    121798546
   04121 Ubiquitin system [BR:sspl04121]
    121798546
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sspl04147]
    121798546
Ribosome [BR:sspl03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    121798546
  Archaea
    121798546
Ubiquitin system [BR:sspl04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   121798546
Exosome [BR:sspl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121798546
  Exosomal proteins of colorectal cancer cells
   121798546
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD OTU1_UBXL Dsc3_N Thioredox_PDIA6_C DUF2604 UBL_UBAC1 TBK1_ULD Fer2_3 Ubiquitin_5 Ogr_Delta
Other DBs
NCBI-GeneID: 121798546
NCBI-ProteinID: XP_042053543
LinkDB
Position
4:10992868..10994151
AA seq 156 aa
MQIFVRTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSSKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgagaaccctaacggggaagacgatcaccctcgaggtggagtcgtcc
gacaccatcgacaacgtcaaggccaagatccaggacaaggaaggcatcccgccggaccag
cagcgcctcatcttcgccggcaagcagctcgaagatggccgcaccctcgccgactacaac
atccagaaggagtccacgctccacctcgtcctccgcctccgtggtggagctaagaagcgc
aagaagaagacctacaccaaaccgaagaagatcaagcacaagcacaagaaggtgaagctc
gccgttcttcagttctacaaggtcgacgattccagcaaggtgcagcgcctcaggaaggag
tgccccaacgccgagtgtggtgctggaacctttatggccaatcattttgaccgccattac
tgcggtaagtgtggccttacctatgtctacaataaggccggcggcgattga

DBGET integrated database retrieval system