Salvia splendens (scarlet sage): 121798582
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Entry
121798582 CDS
T07627
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121798582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121798582
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121798582
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
Motif
Other DBs
NCBI-GeneID:
121798582
NCBI-ProteinID:
XP_042053591
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Position
4:11675808..11679629
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AA seq
589 aa
AA seq
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MAYSFPEEVLEHVFSFLRSDRDRNAVSLVCRSWYEIERWCRHRVFIGNCYAVSPEIVIRR
FPEVRAVEMKGKPHFADFNLVPEGWGGYVQPWIRAMAASYPSLEEIRLKRMVVTDESLDL
IARSFKHFKVLVLASCEGFTTDGLASIAANCRNLREIDLRESEVEDLSGNWLSDFPDNCT
SLVSLNMSCLGSEVNFPALERLVGRCPNLRTLQLNRAVPLEKLPNLLHRAPQLVEFGTGA
YSAEIRPDIYSNVAEAFSVCKQLRGLSGFWDVVPAYLPAMYSACAGITSLDLTSAAIQSP
DLVKIISLCPHVQCLWVLDYIEDAGLEALAASCKDLQELRVFPSDLEAEANVALTEQGLV
SVSEGCPKLQSVLYFCRQMSNAALITIARNRPEMVRFRLCIIEPQAPDYLTLEPLDTGFG
AIVENCKELRRLSMSGLLTDRVFECIGKHAKKLEMLSIAFAGDSDIGLHHVLSGCDSLRK
LEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLAQKMPRLNVEVIDERGHPN
SRPENCPVEKLYIYRTVAGRRVDMPDFIWTMDKNPGSPEVFVSNGAVEL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgtttccagaggaggtcctcgagcatgttttctctttcctaaggtccgac
cgtgaccggaacgcggtgtcgctggtgtgccggtcgtggtacgagatcgagcggtggtgc
cgccaccgcgtcttcatcgggaactgctacgccgtgtctccggagatagtgattcggcgg
ttcccggaggtgcgggcggtggagatgaaggggaagccgcatttcgcggatttcaacctc
gtgccggagggctggggcggctacgtgcagccgtggattagggcgatggcggcgtcctac
ccctcgctcgaggagatcaggctcaagcggatggtcgtcaccgacgaaagcctcgacctg
atcgccagatcgtttaagcatttcaaggttttggtgctcgcttcctgtgagggcttcact
actgacggcctcgcttcgattgctgctaattgcaggaaccttagagagatagatttgcgg
gagagtgaagtggaggacctaagtgggaattggcttagtgatttccctgacaactgcact
tcactggtgtcacttaacatgtcttgtttaggctcagaggttaatttccctgccttggag
cgcctggttggccggtgccctaatttgaggactcttcagctaaaccgtgctgtacccctt
gagaagctgcccaacctgcttcaccgggccccccaattggttgaatttggaaccggggcc
tactcagctgaaatccgacctgatatatactcaaacgtggcagaagcattttcagtctgt
aagcaactcagaggcttgtccgggttttgggatgttgttccagcttatcttcctgctatg
tattcagcctgtgccggaatcacttctctggatttgacttctgcagcgattcaaagtcct
gatcttgtaaaaattattagcctatgtccgcatgtacagtgtctctgggttctggattac
attgaagatgctggtctggaagccctggctgcatcttgcaaggatttgcaagaacttcgg
gtgttcccttctgatcttgaggcagaagctaacgttgctttgacagaacaggggcttgtc
tccgtttctgaaggctgccccaagctccagtctgttctatacttttgtcgtcaaatgtca
aatgctgccttgattacaattgcaaggaaccggccagagatggtccgctttcgactttgt
atcattgagcctcaagctcctgactacctgacactcgaaccacttgatactggttttgga
gccatagtagagaactgcaaggaattacgacgcctttccatgtccggcctccttacggat
cgagtttttgaatgtattgggaagcatgctaagaaattggagatgctttccatagctttt
gccggggatagtgacatcggcctccatcatgttttgtctggatgtgatagcctgcggaaa
ctggaaatcagggactgtccatttggggacaaagctctcttagcaaatgctgcaaagcta
gagacaatgcgatccctttggatgtcatcatgcttggtgagctatggagcgtgtaagctg
cttgctcaaaagatgcccaggctcaatgttgaagttatagatgagagaggtcaccctaat
tcccgaccagaaaattgccctgttgagaaactctacatctaccggacagttgcaggacgg
agagtcgacatgcctgatttcatctggacgatggacaaaaacccagggagcccagaggtt
tttgtgagcaatggtgctgttgagctataa
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