Salvia splendens (scarlet sage): 121798625
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Entry
121798625 CDS
T07627
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121798625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121798625
Spliceosome [BR:
sspl03041
]
Complex C
Other components
Step II factors
121798625
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Tudor_3
Motif
Other DBs
NCBI-GeneID:
121798625
NCBI-ProteinID:
XP_042053648
LinkDB
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Position
4:12500285..12504907
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AA seq
536 aa
AA seq
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MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKSDPNYTKSWYDRGAKTFQAEKFRKGACENCGALTHDKKACVERPRKLGAKW
TGKHIAPDEKIETFELDYDGKRDRWNGYDAASYKHVIQRYEAKDEARSKYLKDEQLKKLE
EKNNNQNKEDGVSDDEDNEDNLKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAHYDPKTRSMREDPLPDMDPNEKFYAGDNQNRVSGQALEFKQLNV
HAWEAFDKGHDVHMQAAPSQAELLYKNFKINKEKLKSHTKDKIMEKYGNAATGEVLPREL
LLGQSEREVEYDRAGRIIKGQEMALPKSKYEEDVYINNHTTVWGSWWKDHQWGYKCCHQT
VRNSYCTGAAGIEAAEASADLMKANIARKEATEEAPAAAEEKRIATWGSEVPDDLVLDQK
RLSEALQKEDERKREERDERKRKYNVKWNDEVTPEDMEAFRMKRVHHDDPMKDFLN
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcgtcagtggcctttaaatcaagggaggatcaccgaaagcaacttgaacta
gaagaggcccgtaaggctgggctcgcaccggctgaagtggatgaagatggaaaggaaatc
aatcctcacattccacagtatatgtcttctgcgccttggtacctcaatgctgagagaccg
agtttgaagcatcaaaggaagtggaaatctgatccaaattataccaagtcgtggtatgac
agaggtgccaagacttttcaagctgaaaaattcaggaagggtgcttgtgaaaactgtggg
gctttgacacacgacaagaaggcttgtgtggaaagaccacggaaattaggagccaaatgg
acaggcaagcatattgccccagatgagaagatagagacctttgagcttgattatgatggg
aagagagatcgatggaatggatatgatgctgcatcttataaacatgtcattcagagatat
gaagccaaggatgaagcaagaagcaaatatttgaaggacgaacagctcaagaagttggag
gagaaaaataataatcaaaacaaagaagatggtgttagtgatgatgaggataatgaagac
aatctaaaagttgatgaggccaaggttgatgagagcaagcaaatggacttcgcaaaggtt
gagaagcgtgtgcgtactacgggtggtggtagcacaggaactgtcaggaatttacgtatt
agagaggatactgcaaaatatcttctcaatcttgatgttaactctgcccactatgacccc
aagacccgttctatgcgtgaggaccctcttccagacatggatccgaatgagaagttctat
gctggagacaaccagaatagagttagtggtcaagctttggagttcaaacagctgaatgtt
catgcttgggaggcatttgacaagggtcatgatgttcatatgcaagctgctccttcacaa
gccgagttgctttataaaaatttcaagatcaacaaggagaagttgaagtcccatactaaa
gacaaaatcatggaaaagtatggtaatgctgctactggcgaagtacttccacgagaactt
ttactgggccaaagcgagcgggaggttgaatatgatcgtgcgggtaggatcataaaaggc
caggagatggctcttccaaagagcaagtatgaagaagatgtttacataaacaaccacaca
actgtttggggttcatggtggaaagatcatcaatggggctacaaatgttgccaccagaca
gtaaggaacagttactgtactggtgctgctggtattgaggctgctgaagcttcagcagac
cttatgaaagctaatatagctcgtaaggaggctactgaagaagcacctgcagcagccgag
gagaaaagaattgctacatggggatcagaggtacctgacgatctggttctagaccagaaa
agacttagtgaggcacttcagaaggaggatgaacggaagagagaggagagggatgaaagg
aaacggaaatacaacgtgaagtggaacgatgaggttacacctgaagatatggaagctttc
aggatgaagagggtccatcacgacgatccaatgaaggatttcttgaattaa
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