Salvia splendens (scarlet sage): 121798670
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Entry
121798670 CDS
T07627
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121798670
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121798670
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
DIM
Motif
Other DBs
NCBI-GeneID:
121798670
NCBI-ProteinID:
XP_042053724
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Position
4:complement(13223081..13228760)
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AA seq
437 aa
AA seq
DB search
MAISLKIIQLSAFLTLLLLANAIAHADSVEEIRKLKSIRNSTMAERLEEFKHDDAVDDPE
AVAAMVNMATRNSTERRKLGFFSCGTGNPMDDCWRCDRNWMRNRRRLADCAIGFGRNAVG
GRDGRYYVVSNPGDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTID
GRGANVHIANGACITIQFVTNIIIHGLHIHDCKRTGNAMVRSSPTHYGWRTMADGDGISI
FGSSHIWIDHNSLSSCSDGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYVRDRVMQV
TIAYNHFGIGLIQRMPRCRHGYFHVVNNDYTSWEMYAIGGSADPTINSQGNRYLAPANPF
AKEVTKRVTNLGSNRWRHWNWRSEGDLMLNGAYFRPSGRGAAASYARASSLAAKSSSLVA
TLTSTAGALRCRRGMAC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttctcttaaaatcatccagctttcagcatttctcactctgctgttgcttgcc
aatgcaattgcccacgcagatagcgttgaagaaattcggaagctgaaaagcatcagaaac
tcaacaatggcggaaaggttggaggaatttaagcacgacgacgctgtagacgatccagaa
gctgtcgcggccatggttaatatggctacccgaaacagcaccgagcgaaggaagctagga
ttcttctcgtgcggaacgggtaacccgatggacgactgctggcggtgcgaccgcaactgg
atgcgcaaccgccgccgcctggccgactgcgccatcgggttcggccgcaacgcagtgggt
gggcgcgacgggcgctactacgtggtgtctaacccgggcgacgacgacccagtgaaccct
cggccgggaaccctccgtcacgccgtgatccaggaccggcctctctggatcgtgttcaag
cgcgacatggtgatcactctcaagcaagagctcatcatgaacagcttcaagaccatcgac
ggccgcggcgccaacgtccacatcgccaacggcgcctgcatcaccattcagttcgtcacc
aacatcatcatccacggcctccacatccacgactgcaagcgcaccggtaacgcaatggtc
cgcagctcgcccacccattacggctggcggaccatggccgacggtgatggcatctccatt
tttgggtcgagtcatatttggatcgatcataattccttgtctagctgctctgatggcctc
attgatgccatcatgggttccactgccatcaccatttccaacaactatttcactcatcat
aatgaggtgatgttgttgggtcatagcgattcgtatgttcgagatagagttatgcaagtg
accattgcctacaaccacttcggaatcggcctcatccagaggatgcccaggtgcagacat
ggatatttccatgttgtgaacaatgactacacatcttgggagatgtatgcgataggtggg
agtgctgatcccaccatcaacagccagggcaacagatatttagccccagccaaccctttt
gccaaagaggtcaccaagagagtaaccaacttaggaagcaatagatggaggcattggaac
tggagatcggagggcgatctcatgctcaatggagcatatttcaggccttccgggcgtggt
gctgcagccagctacgccagggcttccagcctggcggccaagtcgtcgtccctggttgcc
acactgacctccacggccggtgcacttcgctgccggaggggcatggcgtgctga
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