Salvia splendens (scarlet sage): 121798747
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Entry
121798747 CDS
T07627
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121798747
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
90S particles
Other 90S particles
121798747
Pre-60S particles
Other pre-60S particles
121798747
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
HEAT_EF3_N
HEAT_GCN1_C
Motif
Other DBs
NCBI-GeneID:
121798747
NCBI-ProteinID:
XP_042053831
LinkDB
All DBs
Position
4:14388865..14397537
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AA seq
1133 aa
AA seq
DB search
MEDDALEAPQSFVAEADICQQLLTRYARSSAAQHRHLCATAAATRSIIQSASMPLTPISY
FAAAITSLSNYENLDADALGAVTSFISIVLPLVGKGEIKPEKACEAVEILVTLVEESGGK
LGTSGLRAVVKCVGVLVAEFCNLKEWGSVGLGFEWLLRFSIDKRPKVRKSAQDCLLKVFK
LLEHSSISKKASNSIYSLLKRHMPLAAETSNSKIVDGSRHELISRSEHQEVLHLLNIMKH
VIPDLSPKVREKVLSILLKIPGSQSMVAARHVFDVMAAIFETSETKVIISNAEDIFRLLT
SYIALGEMNPAESVLFAANLAKTVLGRLHNGDIDQWESVFPMLIESLAGLLSSSRDNVAL
QASLILRELMDQHIDGKRLLTMESKEKGDDTTHSAEFKSVRVGCTKFYNLLCSSFPILNK
HLLSVVSSLFLKLGKKSDIFMRPILLKLADLMNATSVSTSEVKHLEDCIGSAVAAMGPEI
LLSLIPISLNGKDFSCSNIWLIPILKKNIVGSSLQFFIEHIIPLAESFEKGSKKVENPVI
GQDLQAYAHGCWGLLPVFCHWPIDTYQSFPSLSELLIPFLKKDSFMIEIIAISLQDLVME
NRRVLASDNVGSAQLTDNAAIDYEISHVYSKKTAKKNINALSLGAKELLLPLVDVLFECT
SETREHLQEAISCLVSICDPSVTKEIFIASLKKLQLLDDAGEHGKLEIIADVSSKEKESA
GTDVERCLILDLASCIVEGCDTDLVNILFSLIKHYLQASDVASQMEAYQTLSKILEKHSS
FCSTEFDVVIDLLAGMKPSENIELVKSRFSCLQTLLIHALSKTPDEENTKAFLILNEIIL
MLKDSREEGRKAAYDALHGLSSKLRGSADSSSKELYHILITMITGYLSGSSHIKSGVVSA
LSVLVYSDPNICVAMPDIFPSVMELLHSKAIEVIKAVLGFVKVVVSSLTPNDLHHSLSEI
MDGILRWSSVSRYHFKEKIVVILEILMRKCGCANVKALAPEKYKDFVQGVVENRHGKTRP
EPSDKSLKGQEKRKRDESAISSKEEGNTGRPWKKRDNQKNTGNTSQSTGHSDRTNFRKGE
SNRPRGGDAKRFTGKPSGGEKKQKGRSAFKSNERNLHAAASRNPKHKKSATKN
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgcccttgaagcaccacagtcattcgtcgcggaggctgacatatgccaa
cagcttctaacccgctacgcccgctcctcagctgcgcagcaccgccacctctgcgccacc
gccgccgccacccgctccatcattcagtcagcctctatgccccttactccgatatcatat
ttcgctgccgcaatcacttctctctccaattatgagaacttagacgccgatgctctcggt
gcggtcacctctttcatttcaatcgtgcttcctttggtcggtaaaggagaaatcaagccg
gagaaagcgtgcgaggccgtggagattttggtgacattagttgaggagagtggtggtaaa
ttgggaacttctggtctcagggctgtagtgaagtgtgtgggtgttttggttgcggaattc
tgcaatttgaaggagtggggctcggttggcctagggtttgagtggcttttgaggttctcg
atcgataagcggcctaaggtaaggaaatctgctcaggattgtctcttgaaagttttcaag
ttgttggagcactcttctatctccaagaaggcgagtaattcaatttactcgttgctcaaa
cgtcacatgccattggccgcagaaactagcaattcaaaaatagttgatggaagcaggcat
gagttaatatcgaggtctgagcaccaagaagttcttcatttactgaacataatgaagcat
gttattccagatctctcacccaaggtccgcgagaaggtgctttcaatattgttgaagatc
ccgggttcccaatccatggtagcggcaaggcatgtcttcgatgtcatggcggctatattt
gaaacttcagaaactaaagttataatctcgaatgctgaagacatctttaggctactgacc
tcttacatagctctgggtgaaatgaacccagctgagagcgtgttgtttgctgcaaatttg
gcaaaaactgttctaggaagacttcataatggtgatatagatcaatgggagtccgttttc
cctatgctgattgaatcattagcgggtcttttatcttcctcaagagataatgtggcttta
caggcttccctcattcttagagaactaatggatcagcatattgatggaaaacgtttgcta
acaatggaaagcaaagaaaagggggatgatacaactcacagtgcagagtttaaatcagta
cgagttggatgcaccaaattctacaatttgctgtgttcctcatttccaattctaaataaa
cacttattgtctgtagtttcttctctgttcctcaaacttggtaagaagtcagatatcttt
atgaggcctatacttcttaaacttgctgatctgatgaatgctacttccgttagtacttca
gaagttaaacatcttgaagactgcatcggctctgctgttgctgccatgggacctgagata
ttactttctcttataccaatttccctcaatggaaaagatttttcctgttcaaatatttgg
ctgataccaattttaaagaaaaatattgttggatcatcactacaattctttatagagcac
atcatacctcttgctgaatcctttgagaagggatctaaaaaagttgaaaatccagtaatt
ggccaagatctgcaggcttatgcccatgggtgttggggattgttgcctgtgttttgccac
tggcctattgatacatatcagagttttccctcactttctgaactcttaatcccctttctc
aagaaggactcatttatgattgagattattgccatcagtttgcaggatctagtgatggaa
aatagaagagtgcttgcctctgataatgttgggtctgcacagttgactgataatgctgca
atagattatgaaataagtcatgtctactccaaaaagacggcgaaaaagaatattaatgcc
ttgtctttgggcgccaaagagttgcttctgcctttagttgatgtgctatttgagtgcact
tcagagactcgggaacatcttcaggaagcaatcagctgcttggtatccatatgtgatcct
tcagtaaccaaagagatatttattgcttcacttaagaagttacagctactggatgatgct
ggtgaacatggaaaattagaaatcattgctgatgtttcatccaaagaaaaagagagtgct
ggtactgatgtggaaaggtgtttaatactggaccttgcatcttgcatagttgaaggatgt
gatacagatctagttaatatactattttctcttattaagcattatctgcaggcgagtgat
gtggccagtcagatggaagcatatcaaactctcagcaaaattcttgagaaacattcttca
ttctgctctacagaatttgatgttgtgatagatttgttggctggaatgaagccttcagaa
aacattgaattggttaaaagccgtttttcctgtttgcagacattgctaattcatgcatta
tcgaaaaccccggatgaggagaatacaaaggctttccttatcctgaatgagatcattctc
atgttaaaagattccagggaagaaggcagaaaggcagcttatgatgctttacatggatta
agttccaagttgagaggttcagctgattcttcttcaaaagagctctatcacatacttata
actatgattacagggtatctttcaggttcttctcatataaagagtggagtggtatctgca
ctctcagttttagtttacagtgatcctaatatctgtgttgcaatgcctgatattttcccc
tcggttatggaattgttacacagcaaagcaattgaggttataaaagctgttttaggcttc
gtaaaggtggtagtttcatcgcttactccaaatgatctgcaccattctctttctgaaatc
atggatggaattcttcgttggtcatctgtctcgcgctatcatttcaaagaaaagatagtt
gtgatcttggagattttaatgaggaagtgtggttgtgccaatgtgaaggcccttgcacct
gaaaaatacaaggactttgtgcagggtgttgtagagaatcgtcatggcaagacaaggccg
gaaccttctgataagtctcttaaggggcaggagaaaaggaaacgagatgaatctgccatc
tcgtccaaggaagaaggaaacactggacgaccttggaagaaaagggacaaccaaaagaac
actggaaatacctcacagagcactggacactctgatcgcaccaatttcagaaaaggcgag
tcgaacagacctcgaggtggtgatgcaaaacgcttcacggggaagccctccggtggagag
aagaagcaaaaagggaggtcagcctttaagagcaatgaacgcaaccttcatgctgctgct
tcaaggaatccaaaacacaaaaaatcagcaacaaagaactga
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