Salvia splendens (scarlet sage): 121798751
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Entry
121798751 CDS
T07627
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121798751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121798751
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
121798751
Prokaryotic type
Archaeal type
TFB
121798751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
RB_B
PucR-like_N
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
121798751
NCBI-ProteinID:
XP_042053849
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All DBs
Position
4:14499395..14502716
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AA seq
313 aa
AA seq
DB search
MMSDSYCPDCKRNTEVVFDHAAGDTVCSECGLVLEARSIDETSEWRTFADDSGDHDPNRV
GGPVNPLLGDGALTTVISRAANGSNADSSLARLQNRGGDPDRAIVLAFKAISNMADRLSL
VTTIKDRASEIYKRLEDQKCTRGRNLEALVAACIYIACRQEGKPRTVKEICSIVAGATKK
EIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMSNEEVKAVQETVQKAGDFD
IRRSPISIAAAIIFMVTQLSESKKPLRDISIATTVAEGTIKNAYRDLYPHAARIIPEWYA
KERDLKNLSSPKA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggactcgtactgtccagactgcaagcgcaacacggaggtggtattcgatcac
gcggcgggcgacaccgtgtgctcggagtgcgggctcgtgctggaggcccgctccatcgac
gagacctccgagtggagaaccttcgccgacgattccggcgatcacgaccccaatcgtgtg
ggtggccccgttaacccccttttaggagacggggcgctcaccaccgtcatctcccgggcc
gccaacggctccaatgccgattcctccttggcccgcttgcagaaccgtggaggcgacccg
gaccgggccatcgtcttggctttcaaggctatttccaatatggccgataggttgagcctt
gtaactaccatcaaggatcgagcgagtgaaatatataagaggttagaagatcagaagtgt
acgaggggaagaaacttggaggctcttgtggctgcctgcatttatattgcttgccgtcag
gaaggcaagccacgaactgtgaaagaaatatgctccattgttgctggagccacaaaaaag
gaaatcggtcgagctaaagaatttatcgtcaaacagttgaaggtcgagatgggtgaatca
atggagatgggtaccattcatgcaggagactatttgagacgtttctgctccaatcttggt
atgagcaacgaagaggtcaaagctgtccaagaaactgtccaaaaggcaggggactttgac
attaggaggagccccatatcaattgcagcagcaataatttttatggtaacacagctgtcg
gaatcaaagaaacccctgcgagacatctcgattgcaactacggtggcagaagggacgatc
aagaatgcttacagagatctgtacccgcatgccgctaggatcataccggaatggtacgct
aaggaacgggacttgaagaatctcagcagtcccaaagcataa
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