Salvia splendens (scarlet sage): 121798789
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Entry
121798789 CDS
T07627
Name
(RefSeq) ATP-dependent helicase BRM-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121798789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121798789
03036 Chromosome and associated proteins [BR:
sspl03036
]
121798789
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121798789
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
121798789
Chromatin remodeling factors
BAF complex
121798789
PBAF complex
121798789
GBAF(ncBAF) complex
121798789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
Bromodomain
AAA_14
Motif
Other DBs
NCBI-GeneID:
121798789
NCBI-ProteinID:
XP_042053910
LinkDB
All DBs
Position
4:15272861..15284448
Genome browser
AA seq
2199 aa
AA seq
DB search
MQSGGGHGRSNAASASASPSSSSSAASAFDQQQQQRQQQRQSMAQQFLRKPEGNDAILSY
QAGTIQGTPGATNFSAASGSTQLPQQPRKFIDLGQQHGSPNNPDQSYNRSQGVEQQMLNP
IQQAYLQYAFQSAQQKPTLGMQSQQQVRPAMFGSLGKDQEMRMANMKMQELVSMQAANQC
QGSSSKKPSEQVVQSDKHADNRHRPMPDQRSESKLNHPPLGGQGIQPAPLQALQSQQNIM
NMPNNQIAMAAQMQAMQALALEHNIDLSHPANANVVAQLIPLMHSRMAAQQKANENNTGI
PSVSFGKQHVTSPSVGNEGSPHGNSSSDVSGQSGSSKVKQAVSPSTLGVSSNAALPNNCS
STSAQQFSVPHMPPRQHSSLGHGMPPMHPSQSPGNLSQGVDSFLAKTSVAEASQAQNARQ
LNQSPQSVTPSNDGDLCNPSTSQGGPSSQMRQLHTGFTKQQLHVLKAQILAFRRLKQRGD
VTLPRELLQAIAPPPLDLQMQQLIPPPTNAGKDKLAGETAEEHTKHVEYSEKGAGAAKSV
AGLVNMKTEGPGDDRAAAAATATIQNSVVAAKERRFVGPPGKEEPQHIGSSGKSEQESEP
GNQKTLVRIDVAADRGKGIASQSSASDPVQVKKPIQASNTSQPKDSSSTRKYHGPLFDFP
VFTRKHESLGSSMMNNNSNLILAYDIKDLFADEGGEIHKRKRAEKIGKIDKILAVNLERK
RIRPDLVIRLQIESKKLQLVKCQARLRDEIEQQQQEIMAMPDRPYRKFVRLCERQRQELN
RQSQANQKATREKQLKSIFHWRKKLLEAHWASRDARTTRNRGVHKYHEKMLREFSKMKDD
DRNKRMEALKNNDVERYREMLLEQQTNLPGEAAERYAVLSSFLSQTEEYLHKLGSKITAT
KNQQEVEEAANAAATTARAHGLSEEEVRAAAACARDEVMIRNRFSEMNAPRDSQSVNKYY
NLAHAVNERVIRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMAL
IAHLMEFKGNYGPHLIIVPNAVLVNWKSELHNWLPSVSCIYYVGGKDQRAKLFSQEVLAM
KFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGT
PLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPAHEDDWLETEKKVIIIHRLH
QILEPFMLRRRVEDVEGSLPPKVSIVLKCRMSAIQGAIYDWIKSTGTLRVDPEDEYRKCQ
KNQNYQAKTYKTLNNRCMELRKACNHPLLNYPYFSDFSKDFLVRSCGKLWVLDRVLMKLQ
RTGHRVLLFSTMTKLLDIMEEYLQWRRLVFRRIDGMTSLEDRESAIVEFNRPGTDCFIFL
LSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVGKISS
HQKEDEFRSGGVVDSDDDLAGKDRYVGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTH
EERRLTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEELDWAEDMTRY
DQVPDWLRANTQEVNTTIANLSKKPSKNALYGGMQPPVEVASEISERRRGRPKGKTPIYT
ELDDENGEFSEASSNDRNEYSVQEEEDGDIGEFEDDESTEAPMVNKDQSEEDAPVSADGY
EYQRALDNVRNNSILEEAGSSGSSSHSRKLMRMVSPSVSSQKFGSLSALDGRSGSQSKKL
ADDLEEGEIAISGESPMNQQHSGSWIQDRDEGEDEQVLQPKIKRKRSIRLRPRSARAEEK
PSDKLSLRRGDPTMLPLQVDNKYKTQASDDSARKVLGDSGCIKSEKIDSSIKSKRNLPSR
RNTANVQSALKSGRANYESALADDASEQHLKVNLDCKVAKGPKTSGPKMSEVILRKCKTV
IGKLQRRIDYEGHQIIPQLTELWKRNDYASGDEDSLLDLRKILNRLDRYEYSGVMGLVSD
VQLMLQSSMQFFGFSYEVRSEAKKVHDLFFDIIAVAFSDTDFREARSSMSFTAPVSMPAT
WPSSRQLPASQGKRQKLVKEVDSENAPFLNPQTHMHSKFRNSMPHKESRLGSSSSRDLGQ
LDDTHPFTHPGDLVICKKKRKDREKSAAKSGNGSAGPLSPTGIGRGMKSPGSISGTRDIG
LSQHGWGPLSPQQGNSSVGWANPVKKMRTDAGRRRPSHL
NT seq
6600 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccggtggtggccatggccggagtaatgccgcttcggcctctgcttctccgtcc
tcgtcatcatccgctgcgtccgcatttgatcagcagcaacagcagagacaacagcaaaga
cagtcgatggctcaacagtttctgaggaaacctgaagggaatgatgccattctgtcgtac
caagctggcacaatacaaggaaccccaggggcgaccaatttttctgcagcatctggctcc
acacagctgcctcaacagcccaggaagttcattgatttgggccagcagcatggttccccc
aataatccggaccaaagttataatagaagtcaaggtgttgagcaacagatgttgaatccg
atccaacaagcttatttgcagtatgcatttcagtcagcccaacagaaacctaccttagga
atgcaatcgcagcagcaggtgagaccagcaatgtttggttctcttggaaaagatcaagaa
atgaggatggcaaacatgaaaatgcaagagctggtgtccatgcaagcagcaaatcagtgt
cagggttcctcctccaagaaaccctccgagcaggttgttcagagtgataaacatgcggat
aacagacatcggcctatgcctgatcagagaagtgaatccaaactcaaccatcctccatta
ggtggtcagggaatccaacctgcacctctgcaagctctacaatctcagcaaaatatcatg
aacatgccaaacaatcagatagctatggctgcacagatgcaggcaatgcaggcattggct
cttgagcataatattgatctgtcacatcctgcaaatgcaaatgtggttgcgcagcttatt
ccattaatgcactccaggatggctgctcaacaaaaagctaatgaaaataatactggtatc
ccttctgtatcctttggtaaacagcatgttacctcaccgtcagttggaaatgaaggttct
ccccatggtaattcctcaagtgacgtgtcaggacaatctgggtcttccaaagttaagcag
gcagtttcacctagtactcttggggtgagttccaatgcagctctacctaacaattgtagc
agcacgtctgcccaacagttctctgtgccacatatgccccctaggcagcattcctctctt
ggtcatggaatgcctcctatgcatccttcgcagtcaccagggaatctgagccaaggagtt
gacagttttcttgcaaaaacttctgttgcagaagcttctcaggcacaaaacgccagacaa
cttaatcagtctcctcaatctgtaactccatctaatgatggggatttgtgtaatccatca
acatctcaggggggacccagttcacagatgagacaattgcacactggttttaccaagcag
cagttgcatgtacttaaagcacagatacttgcatttaggcgtctaaagcaaagaggcgat
gtaactttgccgcgtgaactgctccaagctattgctcccccaccacttgatttacaaatg
caacagctgattccacctcccacaaatgctggcaaggacaaattagctggagaaactgca
gaggagcacaccaaacatgtggagtacagtgagaaaggggccggggctgcaaaatctgta
gctggattagttaatatgaaaacagaaggtccaggagatgatagggctgctgctgccgca
actgcgaccattcagaactctgttgttgcagcaaaggagcggaggtttgtgggtcctcct
ggaaaagaagagccgcagcatattggtagttctgggaaatccgaacaggagtctgaaccg
ggcaatcagaaaacacttgtcaggattgatgttgctgcagacaggggtaaaggaattgcc
tcacagtcaagtgcttcagatccagtgcaggttaagaaacccattcaagcaagtaataca
tcccaacctaaggattctagttctacacgaaaatatcatgggccgttatttgatttccct
gttttcaccagaaaacatgagagccttggatcctctatgatgaacaacaatagtaactta
attttagcttatgatattaaagatctttttgctgatgaaggtggagagatccacaaaagg
aaaagggccgaaaaaattgggaaaattgataaaatacttgctgtgaacttagagaggaag
agaatcagaccagatcttgttattcggctacaaattgaatcaaagaaacttcagcttgtt
aagtgccaggcacgcttgagggatgagattgagcagcagcaacaagaaataatggctatg
cctgatagaccatataggaaattcgttcgactgtgtgaacgtcagcgacaggagcttaac
cgacaatcacaggctaatcagaaggcaactagggagaagcaactaaaatccatatttcat
tggcgcaaaaagctcctcgaggcacattgggcttcccgtgatgctcgaaccacccgcaat
agaggagtgcataaatatcatgaaaagatgttgagagagttctccaaaatgaaggatgat
gatcgtaataaaagaatggaagccttgaaaaataatgatgtggaaagatatagagagatg
cttctggaacaacaaactaacttacctggggaggctgcagaaagatatgctgttctctca
tcatttttaagtcaaactgaggagtatcttcacaaattgggcagtaaaataacagccact
aaaaatcagcaggaggttgaggaggcagctaatgctgctgccaccactgcacgtgcacat
ggtctctcggaagaggaagtaagagctgctgctgcctgtgcgagagatgaagtcatgata
aggaaccggttttctgagatgaatgcaccaagagatagtcagtctgttaacaagtactac
aatctggcacatgctgtgaatgaaagggtcataaggcagccttcaatgctacgagctgga
actctacgagactatcaacttgttggtttgcagtggatgctatcattatacaataacaaa
ttaaatggcattttagcagatgagatgggtctgggaaaaacggtgcaggtgatggccttg
attgctcatttgatggaattcaaaggaaattatggccctcatcttattattgttcccaat
gctgtacttgtcaactggaagagtgaattgcataattggcttccgagtgtttcctgtata
tattatgttggtgggaaagaccaaagggcgaaattgttttctcaagaagtgctagccatg
aagtttaatgtgcttgtaacgacctatgagttcatcatgtatgatcgttcaaaactttca
aaaattgattggaaatatattataattgatgaagcacaacggatgaaggacagagagtca
gtattagctcgtgaccttgatcggtatcgctgccaaaggcggttgcttcttaccgggaca
ccattgcagaatgatcttaaagagctttggtctcttttaaacctactgctcccagaagtt
tttgataatagaaaagcatttcatgattggttctctcaaccatttcaaaaagaagggcct
gcacatgaagatgactggctcgagacagagaagaaggtgataattatccatagactacat
caaatattggaaccttttatgcttcggcggcgtgttgaagatgtagaaggatcacttcct
ccgaaggtctcgattgttttgaaatgtcgaatgtctgcaatacagggtgccatttatgat
tggattaaatcaactggtactcttagggttgaccctgaagatgaatatcgcaagtgtcaa
aagaatcaaaattatcaggctaaaacttacaaaacattaaacaatagatgcatggagtta
agaaaagcttgcaaccatccattgctaaactacccatatttcagtgacttctcaaaggat
tttcttgtgaggtcttgtggaaaattgtgggttctggatagagttttgatgaagcttcag
agaacgggacatagggtactgctctttagtaccatgaccaaacttcttgatataatggag
gaatatttgcagtggcgaaggcttgttttcagaagaattgatgggatgactagcttggaa
gaccgcgaaagtgctattgtggagtttaatcggccaggcactgattgttttatcttctta
cttagcattcgtgctgctggacggggtctcaatcttcagtctgctgacacagtgattata
tatgatccggatccaaacccaaaaaatgaggaacaggctgttgctcgtgcccaccgtatt
gggcagacgagggaggtgaaagtaatttacatggaagctgtggttggcaaaatatccagt
catcagaaagaggacgagttcaggagtggtggagtagttgattcagatgatgaccttgct
ggcaaggaccggtatgttggttcaattgagagcttgattcggaataatattcaacagtat
aagattgacatggctgatgaagttataaatgctgggcggtttgaccagaggactacacat
gaagagagacgactaactttagaaacactgttgcatgatgaagaaagataccaagaaaca
gttcacgacgttccttctcttcacgaggtaaaccgtatgattgctcggagtgaggaagaa
gtggagctctttgatcaaatggatgaagaacttgactgggcagaggacatgactcgatat
gatcaggtccctgattggcttcgtgctaatacacaagaagtaaatactacaattgctaat
ttatcaaagaagccatcaaagaatgctttatatggtgggatgcaacctcctgttgaagtg
gcttctgagatttctgagaggaggagagggcggcctaagggaaagactcctatttatact
gaattagatgatgaaaatggagaattttctgaagcaagctccaatgatagaaatgaatat
tctgttcaagaagaagaagatggagacattggggagtttgaggatgatgaatccactgaa
gcgcctatggttaataaagatcaatcagaagaagatgctcctgtttctgctgatggatat
gaataccaaagagctttggataatgtcagaaacaatagcatacttgaagaagcaggctct
tctgggtcctcttcacacagtaggaagttaatgcgcatggtctcaccttccgtgtcttct
caaaagtttggatcactttctgcattagatggcaggtccggctcccaatcaaagaaattg
gcagatgacttagaagaaggagagattgccatatctggagagtctcctatgaaccagcag
cattcaggtagctggatccaagatcgtgatgaaggtgaagatgaacaggtcttgcaaccc
aagataaaacgaaaacgtagtattcggcttcgcccgcggtctgctagggcagaagagaag
cctagtgacaagttatctcttcgtcgtggtgatcctactatgttaccactacaggtagat
aataaatacaagactcaagcaagtgatgacagtgcccgtaaagttcttggagattctggt
tgtattaaatcagagaaaattgattcatctatcaagagcaaaagaaatctaccatcaagg
agaaatacagctaatgtgcaaagtgctcttaaatctgggagagcgaactatgagtctgct
cttgcagatgatgcctctgaacaacacctcaaagtaaacttggactgtaaagttgcgaag
gggcctaaaactagtggccctaagatgtcggaggtcatcctgagaaagtgcaagactgtt
atcggcaagcttcagagaagaatagattatgaaggtcatcaaataataccacagctgact
gaactgtggaaaagaaatgattacgccagtggggatgaagatagccttttggatttgaga
aagattctcaaccgtcttgacagatatgagtacagtggagtcatggggcttgtttctgat
gtgcagcttatgttgcagtctagcatgcagttttttggtttttcatatgaggtgaggtcg
gaggcgaagaaagtccatgatctattctttgatatcattgcggtagcattctcagatact
gattttcgagaagccagaagttccatgtctttcactgctcctgtttctatgccagccact
tggccatcttcacgacagctacctgcttctcagggcaagcgccagaaattagtaaaagag
gtggattcagaaaatgctcctttcctgaacccacagacccacatgcattctaaattcagg
aactccatgcctcacaaggaatcgaggcttggaagcagcagcagtcgggatcttggccaa
ctggatgatactcaccctttcactcaccctggggaccttgttatctgcaaaaagaagaga
aaagacagggagaagtcggctgcaaagtctggaaatggatcagcaggtccattgtcacct
acaggtattgggcgtgggatgaagagcccagggtcaatctcaggcaccagagatatcggg
ttgagccaacatggctgggggccactttcccctcaacaagggaacagcagtgttggctgg
gcaaatcctgtaaagaaaatgagaactgatgctggaaggcggcgtccgagccatttatga
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integrated database retrieval system