Salvia splendens (scarlet sage): 121798827
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Entry
121798827 CDS
T07627
Name
(RefSeq) syntaxin-43-like isoform X1
KO
K08489
syntaxin 16
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121798827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121798827
Membrane trafficking [BR:
sspl04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
121798827
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin_2
Prominin
FlxA
EF-G-binding_N
MCPsignal
EFL1
ZSWIM1-3_C
OmpH
Motif
Other DBs
NCBI-GeneID:
121798827
NCBI-ProteinID:
XP_042053970
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All DBs
Position
4:15799547..15804359
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AA seq
320 aa
AA seq
DB search
MATRNRTILFRRYRDALKSVRAPVGSSSSGGRAVIELSTASLLNPNRSYTPLSTEDPGTS
SRGTVAVGLPPAWVDISEEIATNVQRVRGKMAELSKAHAKALMPSFGDGKEDQRQIEALT
QEITDLLKKSEKRLQRLSAGGPSEDSNIRKNVQRSLATELQTLSMELRKKQSTYLKRLRQ
QKEGSDGVDLEMNIDGSKSTRDDDYDMDDIGFSEHQMARLKKSEAFTAEREREIRQVVES
VSELAQIMKDLSVLVIDQGTIVDRIDYNITNVAASVEDGLKQLQKAERSQKQGGMVMCAT
ILIIMCLVMLVLLVLKEIIF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaggaatcggacgattctgtttagaaggtatagggatgcgttgaagagcgtt
agggctccggtgggctcctcgagctccggcggaagagcggtgatcgagctctccacggcg
tccttgcttaaccctaatcgatcttacactcctcttagcactgaagatcccggaacctcc
agtaggggaacagttgcagtaggtttaccaccagcttgggtggatatatctgaagaaata
gcgactaacgtacaacgtgtgagagggaagatggccgagttatcaaaggctcatgccaag
gctttaatgccttcatttggagatggtaaagaggatcaacgtcagattgaggcactaaca
caagagataaccgatcttttgaaaaagtcagaaaaaaggttacaaagactctctgctggt
gggccttcagaggattcaaatatcaggaaaaatgtccagcgttcgttagctactgagctc
cagaccctctcaatggagctacgaaagaaacaatcaacatatttgaaacggctccggcag
cagaaagagggttctgatggggttgacttggaaatgaacatagatggaagcaagtcgaca
agagatgatgattatgatatggatgacataggattcagtgaacatcaaatggccagacta
aagaaaagtgaagcgttcactgcagaaagggagagagaaattcgacaggtggtggaatct
gtcagtgaacttgctcaaattatgaaggatttgtcagttttagtcatcgatcaggggact
attgttgataggatcgattacaatataacaaatgttgcagcctcggtcgaagatggtttg
aaacaacttcagaaggcagagagaagtcaaaaacaaggtggcatggttatgtgcgcgaca
attcttattattatgtgtttggtgatgctagtacttttagttttgaaggagattatcttc
taa
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integrated database retrieval system
