Salvia splendens (scarlet sage): 121798836
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Entry
121798836 CDS
T07627
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
121798836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121798836
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
121798836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
CDI
Motif
Other DBs
NCBI-GeneID:
121798836
NCBI-ProteinID:
XP_042053980
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Position
4:complement(15868706..15871775)
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AA seq
653 aa
AA seq
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MADEREKAAALIERAVDSTAAEVDPRLLKAIKFVVRNSDSELRCASQTLMSLMKRNHSQV
RYLALLIVDELFMRSKLFRSLLVENLDLFLSLSIGFRRNHPLPPPASIASLLRSKAIEFL
EKWNDSFGIHYRQLRLGYDYLKNTLRFQFPNLQANAARIQQERREREMRTRDILLKKFES
LKANFSSIKEEIHANIDEIDECLGILRMKDDDMQFDPVDNEEMEEFYNSELHQIRLDSLR
EAKKVQVDSENEVVIDALREFYKVLVTKHLAAVQEWISVLIRVEVADHSFRDSALKNLID
IRNLIQSIKRKCEESGCELRKIANAEDEEVIWEEGTVEQFDKGEAGPSFSKTPEAPSTST
ANSTRDVKRAKKLSNVTEKRNAWSSESNKDPVRSELLAEAPVLNWGSFLDRWGPNENVMA
NQRGLDVEGHWGRVDQDAVIPAEKIAELSMRASVYEEKPLEIQPCRAPLKNGALCQRKDL
RVCPFHGPIIPRDDEGNSIKESSSTEEAVDQIQPEESSRNADSNVVHQLLKQAVQNVRER
DKEDAKQREVDKRALKRAKLAEVREHNEAMLRDAAIASTSRSYYVGEDREISNGSRISSR
RKKQTLASMLKKKETSKDRLAQRLLNTNARDATIRQLTTAEEANYREAFPNQW
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgagagggagaaggcggcggcgttgatagagagagccgttgactctactgcg
gcggaggtggatccgcgcctcctcaaggcgatcaaattcgtggtgcgtaattccgactcg
gagctccgttgcgcctcccaaaccctaatgtctctcatgaagcgcaaccattctcaggta
cgttatcttgcacttctcatagtagatgagcttttcatgcgctcaaagcttttcagaagt
cttcttgttgagaacctggatctattccttagcttaagtattggttttagaagaaaccat
ccgcttcctcctcctgcctctattgcatctcttcttcgctcaaaggcaatcgagttctta
gagaagtggaatgattcgtttggaattcattatcgacaactcagattaggttacgactat
ctcaagaatacccttcgtttccagtttcctaaccttcaggctaatgcagcccgtatacaa
caagagagaagggagagggaaatgagaacaagagatatcttactgaagaaatttgaatct
ttgaaagcaaatttctcatcaataaaagaggagatacatgccaatattgatgaaattgat
gagtgtctaggaattcttaggatgaaggacgatgacatgcagtttgatcctgtagataat
gaagagatggaagagttttataattcagaactgcatcagatccgtcttgattctttgaga
gaggcgaaaaaagtccaagtggacagtgaaaatgaagttgttattgatgctctgagggaa
ttctacaaggttctagtcactaagcatctcgctgcagtgcaggagtggatttctgttctt
ataagagtggaagtggccgatcacagtttcagggattctgctttgaaaaatctcatagat
ataagaaatctcattcaatcaataaaaagaaaatgtgaagaatccggatgtgagcttcgt
aaaattgcaaatgctgaagatgaagaagttatttgggaagaaggcactgtagaacaattt
gacaaaggagaagcaggtccaagcttttctaaaactcccgaagcacccagtacatcaaca
gctaatagtacaagagatgtaaaacgagctaaaaaattgtcgaatgtaactgagaaaaga
aatgcttggagtagtgaaagtaacaaagatcctgtacgaagtgagcttttggctgaagct
ccagttcttaactggggatctttcctggaccgctggggaccaaacgagaatgttatggct
aaccaaaggggactggatgttgaaggtcactggggtagggtcgaccaggatgcagttata
ccggctgagaaaattgcagaactgagcatgcgggcatctgtttacgaagaaaagcctctc
gaaatccaaccgtgtagagctcctttgaagaatggtgcactttgtcaaagaaaagatttg
agagtttgcccatttcatggacccatcatccctagagacgatgaaggaaattcaattaag
gagagctcctcaacagaagaggcagtcgaccaaatccaaccagaagaatcaagtcgaaat
gctgacagtaatgtggtgcaccagctattaaagcaagctgtacagaatgttcgggagagg
gacaaagaagatgcaaaacagagagaagtagacaagcgggccttaaagagagcaaagctt
gcagaagttcgggaacacaacgaagctatgctgcgagatgctgcaattgcttcaacctca
agatcctattatgtaggtgaagacagggaaataagtaatggatccagaatttctagtaga
agaaagaaacaaacgctggcatcaatgctgaaaaagaaagaaacttctaaagacagattg
gctcagaggttactgaacactaatgcaagagatgctactatccgacagttgacaacggct
gaagaggcaaactaccgagaagcatttccaaaccaatggtag
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