Salvia splendens (scarlet sage): 121798910
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Entry
121798910 CDS
T07627
Name
(RefSeq) DNA polymerase zeta catalytic subunit-like isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121798910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121798910
Enzymes [BR:
sspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121798910
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
121798910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
DNA_pol_B_exo1
DZR_2
Motif
Other DBs
NCBI-GeneID:
121798910
NCBI-ProteinID:
XP_042054105
LinkDB
All DBs
Position
4:17043861..17052783
Genome browser
AA seq
1963 aa
AA seq
DB search
MGSSQPQLFSVRIVSIDYYMAPPIPDFDISYSHFHGGKVNEVPVIRIYGSTPAGQKTCLH
IHQVLPYLYVPISDLGPITNDEADSCMHSVSLALEKALKLKGNTGSKRQHVHGCNLVRAK
KFYGYHSSEELFVKLYFYHPQDVSRAANLLLVGAVLDKNLQPYESHIPFLLQFLIDYNLY
GMGHLHVSKMKFRHPVPDVYSNQKFKYSGKLRTSRDDTTCTDFQADSGGDLSLATPIWIS
STIPDGWIWQFSNQLSSSAGEDYPLFRRQSTSELEADAVAHDIVNQQFISYVSMSQTSSN
TKMVQSLIPIWEEEHVANGVTEVMLLDPEKPPPQDVLRDLLGGAEFEKYIEVLGDSDNCS
LLTPASVKSSAVCGDFLDPVAANLEESSYLPSNYLKALEKNGPLISLSSPFQKFVAAETN
ETDASKQLQLSADVEPSTAKDEDALRLLKWLASSQASEDINSDDELTRETILSPLLPSKE
IDKVLERANVDYESESQKECQDILDSVDMINGEDQDAIPFQSAEYNDPNKRLWSRVIPQV
DGSSDDPPSTPCSGESPKTEYSEAKSNVEAQSWSRIASNLRNKHLNKRPQWGSLPVCCQK
VSDFSPTKVKEDLGTSWTGNEPDKLPCVKVDKKKDICHTGKASVIAECSTRDLMRRKRSC
RVELADHRSPVGVRDAKLCSDSDCASRDVYLASRSRSCDENKKALTSQTKSHERKINSSV
EVCSEAIHINPSCSPVLGELLGSSCEDGMDAENLLKIGKTECVNHNYSCSGEYLHSTVDC
NVNVDESEQAHVSTMETFGKVLGRTMQLTDIVESCTVPSNSAARDPAYNTDCTSERFTTS
ISIHKLHNVPAENLKGMGRETANMQFEKSPYCGKDPGMDEAYDSSKDVDQEAETVKLTAM
TIPKKPPTIERKDEGKTDASLSLQGRSGNDLQPFFERNFLEDEQLLCVNPRKSGLVDNHE
AVMGVPVLYQNDGSYLYMLTPAMSPPSRQSVDRWLLSDCSDISRHKMDSPPQFLPMSDGL
SGDLVEERDSQATDRSILPESPFMSVCDKRPKRTQPPEHNQEIKRKLETSFSLDTSQISG
PDKKMRLTPLSQIGFRDPASAGEGQQLTLLSVEVQAKSRGDLRPDPRFDGINAIILVLQE
DNASMFDTYVLLRCDSANLEKDLDAVLESKTFVFQEESQLFNHFTKLIHDFDPDILMGWD
VQSGSLGFLAERAAHLGIGLLNNISRTPSRINISSADSRTSDKEKDSKSVTGEVVHLENS
IIEDEWGRTHASGVHVGGRIVLNVWRLMRNEVKLNMYTVEAVAETVLRRKIPYIPWKVLT
RWFASGPGRARYRSIDHTSERTKLNLQILNQLDMINRTSELARVFGIDFFSVLSRGSQYR
VESMFLRLAHTQNYLAISPGTQQVASQPAMECIPLVMEPESRFYADPVVVLDFQSLYPSM
VIGYNLCFCTCLGKITPPMTHGLGVCAYSPHLNTLRNLKHELLVAPNGVTYVPSKVRRGI
LPRLLEEILSTRIMVKQAMKKLDPSQLVRHRILNARQLALKLIANVTYGYTAAGFSGRMP
CAELADSIVQCGRKTLETAISFVNSNDKWKAKVIYGDTDSMFVLLKGRSVQEAFAIGREI
ASAITKMNPSPVTLKMEKVYHPCFLLTKKRYVGYSYESPDQSKPIFDAKGIETVRRDTCA
AVSKTMEQSLRIYFESQDIYKVKAYVLRQWTKILSGRVSIQDFVFAKEVRLGTYAERAYS
LPPAAIVATKSLRKDPRAEPRYAERIPYVVIHGEPGARLMDMVVDPLELLAINSPFRLND
IYYIRKQIMPALQRVFGLVGADLNQWFLDTPRPVRETAGKRQTVAQNPQRMRIDYYYASQ
HCTICGEVVQGSAHLCHDCSKNETTVAIALAGRTSKLEKNIQHLTAICRHCGGGDWVVES
GVKCTSLACSVFYERVKVQKELQSLPEVATATGFYPKCMVEWF
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atggggagttcgcagccccaattgttcagcgtcagaatagtttcaatcgactattacatg
gcgcctccgattcccgacttcgacatttcttatagccatttccacggtgggaaggtgaac
gaggttccagtgataaggatatacggttcgactccggctggtcagaagacatgtttgcac
attcatcaagttttaccttatctgtatgttcctatttctgatctggggcctataacaaat
gatgaagctgattcatgcatgcattctgtatctcttgcccttgagaaggccctgaagctt
aaaggaaatactggctcaaaacgtcaacatgtacatggctgcaatcttgttcgtgccaag
aagttctatggttatcattcttcagaggagctctttgtgaagttatatttctaccatcca
caggatgtttctcgtgctgcaaatcttcttctggttggtgctgtactagataagaatttg
cagccatatgaatcacatatacctttccttctgcagttcttgattgactacaatttatat
ggaatgggccatttacacgtttctaagatgaagtttcgccatcctgttccagatgtttac
tcaaaccagaaattcaagtacagtggtaaactgagaacatcaagagatgacaccacttgc
acggattttcaggcagattcaggtggtgatttatctttggctactccgatatggatatct
tctacgattcctgatgggtggatatggcaattttcaaatcaacttagttcgtcagcaggt
gaagattatccactgttcaggcgccagagtacctctgaactggaagcagatgctgtagca
catgatatcgtaaatcagcagtttatatcatatgtctctatgtctcaaacttcttccaac
acgaaaatggttcagtcgttaataccaatatgggaggaagaacatgtggcgaatggggta
actgaagtcatgcttcttgatccagagaagccaccaccacaagatgttttaagggatctg
ttaggtggggctgagtttgagaaatatatcgaagtgttaggtgattcggataactgctca
cttttgactcctgcgtcagttaagtcttcagcagtttgtggagattttctcgaccctgtg
gctgctaaccttgaagaaagcagttatttgccatccaattatttaaaggcacttgaaaag
aatggacctcttatatcattaagctcaccatttcagaaatttgttgcagcagaaactaat
gagactgatgcatctaaacaactgcaactatctgccgatgtggaaccgtcaactgcaaag
gatgaagatgccttaaggcttttaaagtggcttgcatcttctcaggcttcagaagatatc
aactcagatgatgaactgactcgtgagacaattttaagtcccttacttccttccaaagaa
attgacaaagtgttagagagagccaatgtagattatgagagtgaatctcaaaaagagtgt
caagatattctcgattctgttgatatgattaatggtgaagaccaggatgccatacccttc
cagtctgcggagtacaatgatcctaacaaacgtttgtggagtagggttattccgcaagtg
gatggatccagtgacgatccaccatcaactccctgctcaggcgagtcacccaaaacagaa
tatagtgaagcaaagtcaaatgttgaagcacaatcatggtctagaatagcctcaaacttg
agaaataagcatctaaataaaagacctcaatggggttctttacctgtttgttgtcagaaa
gtgagtgatttttcacctaccaaggtaaaagaagatttgggaacatcttggactggaaat
gaaccagataaacttccatgtgtaaaagttgataagaagaaagatatatgtcacactggg
aaagctagtgtaatagctgaatgctccacacgggatttgatgaggaggaaacggtcttgt
cgagtcgaactcgctgatcataggagcccagtgggagttcgggatgcaaaattatgctct
gattctgattgtgcaagcagagacgtataccttgcctcaagatcaaggagttgtgatgaa
aacaaaaaggctcttacttcacagacaaagtcacatgaaaggaaaataaattcaagtgtt
gaggtctgcagtgaggctattcatataaacccatcttgttcccctgttttaggggaattg
cttggatcatcttgtgaggatggtatggatgcagaaaatctactaaaaataggaaaaact
gagtgtgttaatcataattacagctgttcgggtgaatatttgcacagcactgttgattgt
aatgtgaatgttgacgagtctgaacaggctcatgtttcaactatggagacttttggtaaa
gttttaggtcgcacaatgcagctaactgatattgtggaatcatgtactgtcccttcaaat
tcagctgcaagggaccctgcatacaacactgattgcacaagcgaaaggtttacaacctca
atctctattcacaagttgcacaatgttccagctgagaatttgaagggcatgggaagggag
acagcaaacatgcagtttgaaaagtcaccatattgtggaaaagatcctggtatggatgaa
gcttatgactcatcaaaagacgtagaccaggaagctgaaactgtaaaacttactgctatg
accatccccaagaaacctccaactatagagaggaaagatgagggcaagactgacgcttct
ttgtctcttcagggaagatctggaaatgatttacagcctttctttgagaggaatttcctg
gaagacgaacaacttctatgtgttaaccctagaaaaagtgggcttgtcgataaccatgaa
gcagtaatgggcgttcctgttctttaccagaatgatgggtcatatttatacatgctgact
cctgcaatgtcacctccatcaaggcaatctgttgatagatggctgttatctgattgctct
gacatttccaggcacaagatggactcaccaccgcaatttcttccgatgtctgatggatta
tctggtgatttggtggaagaacgagattctcaggctactgacaggtccatcctgcctgag
tctccttttatgtccgtgtgtgacaaaaggccaaagcgaactcaaccaccagagcataat
caagagattaagaggaaactagaaactagcttctcactagatacctctcagatatctggt
cctgataaaaagatgaggctcactccattaagtcagattggttttcgagatccagcaagt
gcgggtgaaggacagcagctaacattgcttagtgtggaggtacaggctaagtctagaggg
gatttaagacctgatcctcgctttgatggcatcaatgctatcattcttgttcttcaagag
gacaatgcatctatgttcgatacttatgttcttctgcgatgtgattctgctaatctggaa
aaggaccttgatgcagttctggagtccaagacatttgtttttcaggaagaatcacaattg
tttaatcatttcacgaagctaatccatgattttgaccctgatattcttatgggctgggat
gttcaaagcggttcccttgggtttttggctgaaagggcagcacatcttggcattggtttg
ctgaataatatatcgaggacgccatctcgaatcaatatatcttctgcagattctaggact
tctgacaaagaaaaagattccaaatctgtaactggtgaagtagttcatctagagaactcc
ataattgaggatgagtggggccggacgcatgccagtggtgttcatgttggtggtagaatt
gtgctcaatgtctggagactaatgcgtaatgaagttaagctaaatatgtacacagttgaa
gctgttgctgagacagttctgaggcgaaaaattccatacatcccttggaaagtgctaaca
agatggtttgctagtggccctggacgagcaaggtatagatctattgatcatacaagtgag
agaacaaagttgaatttacagattctgaatcagctcgatatgataaatcgaacatcagaa
cttgctagagtatttggtattgacttcttttcagtactatctcgaggctcacagtatcgt
gttgaatcaatgtttttgcgtttagctcacacacaaaactatcttgccatttcccccgga
acccaacaggttgctagtcaaccagcaatggaatgtataccgcttgttatggagccagaa
tcaaggttctatgcagatcctgtcgttgttctggattttcagtctctttatccgtcgatg
gtaattggatataacctttgcttttgtacatgtctgggaaagatcacacctccaatgaca
catggacttggcgtctgtgcatattcaccacatttaaatacgttgcgcaatttgaaacac
gagttactggtagctccaaatggtgtcacctatgttccgtcaaaggtacggagaggtata
ctacctaggctgttggaagagatactatcaaccagaatcatggtgaaacaagctatgaaa
aagttagatccgtctcagcttgttcgacacaggatattaaatgctcgacagcttgcttta
aagcttatagcaaatgtcacctatggctatacagctgctgggtttagtggacgcatgcct
tgtgctgaacttgcggatagtatcgtgcaatgtggccgtaaaactttggaaactgcaatc
tctttcgtaaactcaaatgacaagtggaaagcgaaagttatttatggtgatacagatagc
atgtttgtgctccttaaagggcggtctgttcaagaagcattcgcgattggacgagaaatt
gcatcagcaataaccaaaatgaatcccagtcctgtcacattgaaaatggaaaaggtttac
cacccctgcttcctccttacaaagaagcgatatgttggttacagctacgagagtcccgat
cagagcaagccgatctttgatgctaagggtattgagacagttcgaagagatacatgtgct
gctgtatccaaaactatggagcagtcattgaggatctatttcgaaagccaggatatatat
aaggtaaaagcttacgtgctgcgccagtggacgaagatattatctggcagggtctccatt
caggactttgtttttgcaaaggaggttcgcttgggcacgtatgctgaacgtgcttattca
cttcctccggctgcaattgtggccaccaaatcactgcgcaaagaccctcgggcagagcct
cggtatgctgagcggataccttacgttgtgatccatggtgagcccggtgctcgtctaatg
gacatggtggtcgacccgcttgaacttctagccatcaattcccctttcagactaaatgat
atctattacattaggaaacaaatcatgcctgcattgcagagagtgtttgggctggttgga
gctgatctgaaccagtggttcctggacacaccccgcccggtgcgcgaaactgctgggaaa
cgccagactgtcgcgcagaatccacagaggatgagaattgattattactatgcttcgcag
cattgcactatctgtggagaggtggttcagggatcagctcatctctgccatgattgttcc
aagaatgaaacaactgttgctatagccttggcgggaagaacttcgaaactcgaaaagaat
atccaacaccttactgctatatgtcgtcattgtggagggggggattgggttgttgaaagt
ggagtgaaatgtacttcgttagcgtgctcagttttctatgagagagtaaaagttcagaaa
gaattgcagtcactgcctgaagtagctacagcaactggtttctacccaaaatgcatggta
gagtggttctaa
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integrated database retrieval system
