Salvia splendens (scarlet sage): 121799017
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Entry
121799017 CDS
T07627
Name
(RefSeq) cell division control protein 48 homolog E-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121799017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121799017
03009 Ribosome biogenesis [BR:
sspl03009
]
121799017
04131 Membrane trafficking [BR:
sspl04131
]
121799017
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121799017
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121799017
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
121799017
Membrane trafficking [BR:
sspl04131
]
SNARE
SNARE associated proteins
Others
121799017
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121799017
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121799017
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_2
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
AAA_17
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
nSTAND_NTPase5
Parvo_NS1
AAA_18
ABC_tran
AAA_lid_PRS2_C
NB-ARC
Viral_helicase1
AAA_7
NACHT
Vps4_C
TsaE
IstB_IS21
ResIII
Zeta_toxin
AAA_24
DUF815
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
121799017
NCBI-ProteinID:
XP_042054259
LinkDB
All DBs
Position
4:complement(18883916..18888140)
Genome browser
AA seq
806 aa
AA seq
DB search
MSQPESSDSKGTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVSIHPDTMEKLQLFRGDT
ILIKGKKRKDTVCIALADDTCDEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRVHI
LPIDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKIIETDPVEYCVV
APDTEIFCEGEPVKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFVINGPEIMSKLAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKARAHIIVIGATNRPNSIDPAL
RRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTE
AALQCIREKMDVIDLEDDTIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWE
DIGGLTNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSQGDAGGAA
DRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDAALLRPGRLDQLIYIPLPDEESRLQIF
KACLRKSPIAKDVDLTVLAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRSRDNP
EAMEEDVDDEVAEIRASHFEESMKYARRSVSDADIRKYQSFAQTLQQSRGFGSEFRFADN
TSGSTAADPFAAPTAAADDDDDDLYN
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaccggaatcatccgattctaagggtacaaagagggattttagcactgcgatc
ttggagaggaaaaaggcgccgaatcggctggtggtggatgaggctgtcaacgatgataat
tcggtggtgtctattcaccctgatacgatggaaaagctccagcttttccgcggtgacacc
atcttgatcaagggcaagaaaagaaaggatacagtgtgcattgcccttgctgatgatacc
tgtgatgaaccaaagatccgaatgaacaaggttgtcagaaataacctcagggttaggctt
ggtgatgtggtctccgtgcatcagtgtgctgatgtgaagtatgggaagcgtgtccacata
cttcccattgatgacacagttgaaggggttactgggaatctctttgatgcctacctgaag
ccatatttcttggaggcttatcggccagtgagaaagggtgacctgttccttgtcaggggt
ggaatgagaagtgtagagtttaaaattatcgagactgatcctgtggagtactgtgttgtt
gctcctgatacggagatcttttgtgagggagagcctgttaaaagggaggatgagaaccga
ttggatgaggttggctatgatgatgttggtggcgtccgcaagcagatggctcagattcgt
gagttggtagagctgccactgaggcacccacagcttttcaaatcaattggtgtcaagcct
ccaaaaggaatattgctctatggacctccaggatctggaaagaccttaattgcccgagct
gtggccaatgagactggtgctttcttctttgttatcaatggaccagaaattatgtctaag
ttggcaggagaaagtgaaagcaatctaaggaaggcttttgaagaagctgagaagaatgca
ccatccatcatattcattgatgaaattgattcaattgcgcccaagagggagaaaaccaat
ggagaggttgagaggagaattgtttcgcaactgttgacattgatggatggtctgaaagcc
cgtgctcatattattgtcattggtgctacaaaccgtcccaatagcattgaccctgccctt
cggaggtttggtaggtttgacagggaaatagacattggtgttccagatgaagttggacgt
ctcgaggttctccgtatccacacaaagaacatgaagcttgctgaagatgttgatttagaa
aggatctccaaggacacacatggctatgttggtgctgacttagctgcattgtgcactgag
gccgcccttcaatgcatcagggagaagatggatgtgattgatttggaagatgacaccatt
gatgcagagatactaaattccatggctgttaccaatgagcacttccagactgctctcgga
acaagcaatccatctgctttacgtgaaacagttgttgaagtgcctaatgttagctgggaa
gatattggaggccttacaaatgtaaagcgtgaactccaagagactgttcaatacccagtg
gagcatcctgagaagtttgaaaagtttggcatgtcaccttccaagggggtgcttttctac
ggccctcctggatgtggaaagactttactggccaaggctattgcgaatgaatgtcaggca
aacttcatcagtgtcaagggccctgagttgctgactatgtggtttggtgagagcgaggcc
aatgttagagaaatttttgataaggctcgtcagtctgctccttgtgttttgttttttgat
gaattggactcgattgcaactcagagaggaagcagccaaggagatgccggtggtgctgct
gaccgggtattgaatcagctcctgactgaaatggatggaatgaatgctaagaaaacagtt
ttcattattggtgcaaccaacaggcctgatataatcgacgctgcccttctccgtcctggc
cgtcttgatcagctgatttacattcctcttcctgacgaggaatcacgtcttcagattttc
aaggcatgcttgagaaagtcacccattgctaaagatgttgaccttacagtccttgctaaa
tacactcaaggtttcagcggcgctgacattacggaaatatgccaacgtgcttgcaaatat
gccatcagagagaacattgagaaagacattgagaaggagaggagaagcagagacaacccc
gaagccatggaggaagatgtggacgacgaagtagctgagatcagggcttctcactttgag
gaatcaatgaagtatgctcggaggagtgttagcgatgctgacattcgcaagtatcagtcg
tttgctcagacgctgcagcaatcaagaggattcggttctgaattccggtttgctgacaat
actagtggttctactgcagccgatccttttgcagctcccaccgccgcagccgatgacgat
gacgatgacctttataattag
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