Salvia splendens (scarlet sage): 121799334
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Entry
121799334 CDS
T07627
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121799334
Membrane trafficking [BR:
sspl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121799334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
DUF4718
Motif
Other DBs
NCBI-GeneID:
121799334
NCBI-ProteinID:
XP_042054593
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All DBs
Position
4:complement(28954417..28961673)
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AA seq
1386 aa
AA seq
DB search
MASNPPFSVEDNTDEDFFDKLVNDDDDVDFKATTSPESGGNHAFTNGNESDEANAFANLS
INEVEDHGEVNAKQVFSSDLSAVDDLSAKGETVEQISKKETRDERGIPLVSADSFEFSNL
VQKEGNGNDGAIVLHNANSGNTDNVGVSDVPMLSETSSGLEATGVKEVAWGSFEKDLVQK
DSNAFGSYSDFFTEFEGDRPIDAFSNTAGVTSKNGTQDAIGNDVQGTNYMGNVDSYGQYS
NAQNGGVEADQSSSVQDMNSTLYWESQYPGWKYDYSTGQWYQIDGYDGVSSVQGNADSNV
TSTWEEAATTETVSNWNQASLASDAMETTNWNKVSEVSGDSSVVSTDWNQASNNNNGYPA
HMVFDPQYPGWYYDTIAQEWRALESYTQSAQSTAQVHDQMSKDDNLSTDTFSQNNTLKAS
SLYDQGNNYNPQGFGSQSPDQNWLGSVNNYNQQNLSLHGNQQSNVQYYENLSQHQNDYSM
PSQFVGGNFSQHFNDSKVKQNDPRYFSNDYYSQNPMNFSQQQNQNTQVTYIPALGRSSAG
RPAHALVAFGFGGKLIMMKHNCSNQNLNFGSQNPLAGSISVLNLSEVLTGNIDAVNHGRG
VSTYFQALYQHTLPGPLTGGSVATKELNKWIEERLSNSEPADMDYRKAEVLRLLLSLLKI
ACQYYGKLRSPYGTDAAMKQENDAPESAVAKLFASAKRNALQFNQYGNVTQCLQQLPSEG
QLQATAAEVQNLLVSGRKKEALQCAQEGQLWGPALVLAAQLGDQFYGETVKQMALCQLMA
GSPLRTLCLLIAGQPADVFSADTTAVNNMAGAVNVPQQPTQFGANCMLDDWEENLAVITA
NRTKDDELVLMHLGDCLWKERTDIIAAHICYLVAEASFEPYSDSARMCLIGADHWKKPRT
YASPEAIQRTEIYEYSKTLGNSQFVLLPFQPYKYVYALMLAEVGRTTDALKYCQAVLKSL
KTGRTQELEYLRNLVSSLEERIKAHQQGGFSVNLAPKEFIGKLLNLFDSTAHRVVGGLPP
PIPTQGGAVHGNENNYQSPRVSSSQSTMAMSSLVSQSMEPINDWAADNKKTLHTRSVSAP
DFKRSPMQSQAEPPKEANSASTEDKAPAASSTSRLGRFSFGSQLFQKTVGLVLKPRGRQA
KLGDTNKFYYDEKLKRWVEEGVEPPAPEAALPPPPKASVFQNGASEKSFLQSEPPHNNGN
QEFLSPGTMDNSSGMPPLPPTANQYSARGRMGVRSRYVDTFNKGGGNTVSGFSPSVPSAK
PADGANPKFFVPAPVSHGEQPVVDTHVEEKQNASFTTYEDPPSPSNDSFYSPRLSASMAP
MPRFGSMNNIYNKGASDSSFTPHSRRTASWGGSLNDAMSPPNRTQSAGESVGMRPPSFMQ
NDSFGE
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccattttctgtggaggataatacagacgaagattttttcgataaa
ttagtgaatgacgacgacgatgtggattttaaagccaccacatcgccggaatctgggggc
aatcatgccttcacgaacgggaatgagtcagatgaggctaatgcttttgcaaatttgagt
atcaatgaggttgaagatcatggtgaggtcaatgctaaacaggtcttcagtagtgatctt
agcgcagttgatgatttaagtgcaaaaggggagacggttgagcagattagcaaaaaggaa
acaagggatgaaaggggaattcctttggtatcagctgattcatttgaatttagtaacttg
gtacaaaaagagggaaatggaaatgacggtgctattgttttgcacaatgctaacagtggt
aatactgataatgtgggtgtctctgacgtgccaatgctgagcgagactagtagcggatta
gaagcaactggagtgaaagaagttgcttggggttcctttgagaaggatttggttcagaag
gatagtaatgcctttggatcatactcagactttttcactgaatttgaaggggaccgtccc
attgatgcatttagcaacacagcgggggttacttcaaagaatgggacacaagatgccatt
ggaaatgatgtacagggaaccaattatatgggtaatgtagacagttacgggcagtacagt
aatgcacagaatggtggtgttgaagcagatcagagttcatctgtgcaggatatgaatagc
accctgtactgggaaagtcaatatccaggttggaagtacgactacagtactgggcaatgg
tatcagattgatggctatgatggtgtttctagtgtgcaaggaaatgccgactctaatgta
acttctacatgggaagaggccgctacaacagagactgtttctaattggaatcaggcctct
ctggcaagtgatgccatggaaacgacaaactggaataaggtgtcagaagtgagtggtgat
agcagtgtggtttcaacagactggaatcaggcttctaacaataataatggttacccagct
catatggtctttgatcctcagtaccctggatggtactatgatactattgcccaagaatgg
cgtgctttggagtcatacacccaatcagcgcagtctactgctcaagttcacgatcagatg
agtaaggatgataatttatctactgatacattttctcaaaataacactctgaaggcaagc
agtttgtatgatcaaggtaataattacaatcctcaaggctttggcagccaaagcccagat
cagaattggttgggatcagtcaacaactacaaccagcagaacttaagtctgcatggaaat
caacaaagtaatgtccaatattatgagaatctaagccagcatcaaaacgactattccatg
ccttcccagtttgttggtggaaacttcagtcaacatttcaatgactccaaagtcaagcaa
aatgacccgagatacttttcaaatgactattatagtcaaaaccccatgaacttctctcag
caacagaatcagaatactcaagtgacatacattccagcattgggaaggtcatctgctggt
cgtcctgctcatgctttagttgcctttggttttggtggcaagctcattatgatgaaacat
aactgctctaatcaaaatttgaattttgggagccagaatcctttggccggctcaatatct
gtcctcaacttatcagaagttttgactggaaacattgatgctgtaaaccatggaaggggt
gtaagtacttatttccaggctctctaccagcacactcttccaggtcctcttactggtgga
agtgtggccactaaggagttgaataaatggattgaggaaaggttatcaaattctgagcct
gcagatatggattacagaaaggctgaagtattgaggctgctcctgtcactattaaaaata
gcttgtcagtattatggaaaacttcgatctccttatggcacggatgctgcgatgaagcag
gaaaacgatgccccagaatcggcagttgccaaactgtttgcttctgctaaaagaaatgct
ttacagtttaatcagtatggcaatgttacacaatgcttgcagcaacttccatctgaagga
cagttgcaggccactgctgccgaggttcaaaatcttctggtttctggaagaaagaaggag
gctttacaatgtgcacaggagggacagttgtggggtcctgcccttgttcttgctgctcaa
cttggtgatcaattctatggtgaaactgtcaagcaaatggcactttgccaattaatggct
ggatcacccttgcgaacattgtgcctgctcattgctggccaaccggctgatgtcttttct
gcagatactacagctgttaacaacatggctggtgctgtaaatgtgcctcaacaacctaca
cagtttggagctaattgcatgctggatgactgggaagaaaatttggctgtgataactgca
aatagaacaaaggacgacgaacttgtgcttatgcatcttggtgattgtttgtggaaggaa
agaactgatataattgctgctcatatatgctatttggttgcggaagctagctttgagccg
tattcggacagtgcaagaatgtgtctcatcggtgcagatcactggaaaaagccacggacg
tacgcaagtccagaagcaattcagagaacagagatatatgagtattcaaagacacttggg
aactctcagttcgtcctacttccatttcaaccttataagtatgtatatgcactcatgttg
gccgaagttggaaggacgactgatgcactgaagtactgtcaagcggtactaaaatcgctt
aaaactggtcgaacacaggagctggagtatctgaggaatttagtttcatcccttgaggaa
aggattaaagctcatcaacagggaggattctctgtaaacttagctcccaaggaatttatt
ggtaaattgctaaacctttttgatagcactgcacatcgggttgttgggggcctgccaccc
cctataccaacacaaggtggtgcagttcatggtaatgagaataattaccagtcccccaga
gtatcaagtagtcaatcgacaatggctatgtcttcattagtttctcaatctatggagcct
ataaatgattgggcagctgataacaaaaagactctgcacacaagaagtgtttcagcacct
gactttaaaaggagtccaatgcagagtcaggctgaaccaccaaaagaagcaaattctgct
agcacagaggacaaagcaccagcagctagcagtacgtctcgcttgggtcgttttagtttt
ggatctcagctatttcagaagactgttggtttagtactcaaaccacgaggccgccaggca
aaattgggtgatacaaataagttttattatgatgaaaaactcaagagatgggtggaggaa
ggtgttgaacctcctgcacctgaagcagctcttccaccaccacccaaggcttcagttttt
cagaatggagcatcagagaagagtttcttgcaaagtgagcctcctcataacaatgggaat
caagaatttttaagcccaggcactatggataacagttcaggaatgcccccacttcctccg
acagccaatcagtactcagcacgtggaaggatgggtgttcgctctaggtatgttgacact
ttcaacaaaggtggtgggaacacagtaagtgggttctcgccttctgtaccttctgccaaa
cctgcggacggcgccaacccaaaattctttgttccggcaccagtatcccatggtgagcag
ccagttgttgacacgcatgtagaagaaaagcaaaacgcttcattcactacttatgaagat
cctccctccccttcaaatgactcattctattcgcctcgtctctcagcttccatggcgcca
atgccaagatttggaagcatgaataacatatacaacaaaggggcgagtgatagttccttt
acgccacactcacggcgtactgcttcatggggcgggagcttaaacgacgcaatgagccct
ccaaataggacgcaatctgcaggagagtcggtaggtatgcgtcctccatctttcatgcaa
aatgacagtttcggagaataa
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