Salvia splendens (scarlet sage): 121799479
Help
Entry
121799479 CDS
T07627
Name
(RefSeq) rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121799479
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
121799479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
DER1
UBA_RAD5A
CUE
UBA_4
UBA_3
Motif
Other DBs
NCBI-GeneID:
121799479
NCBI-ProteinID:
XP_042054800
LinkDB
All DBs
Position
4:32199331..32202926
Genome browser
AA seq
296 aa
AA seq
DB search
MNGGPSGFNNAPVTRTIVIVSALFTIIFGIQGRSRNLGWSYQDIFRKLQIWKLIVSVFGF
SSTPELLFGIYLLYYFRVFERQIGSNKYTVFIIFSIAISILLEVFALLLLKDPSLNILTS
GPYSLIFSSFVPFYFDIPVSTRFHVLNLKFSDKTFIYLAGLQLFLSSWKRSMVPGICGIL
AGSLYRMNILRVRRMKFPEAIASFFSRLSFPSSMGSSTPATGSSRNVLGSAPTYPGRQME
GNYPAPTLSTLMEPPEDSIATLVSMGFDRNSARQALVRARNDVNAATNILLESQGH
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggcccttctggttttaataatgcgccggtgacaagaacgattgtgattgtc
agtgctctttttacaatcatttttgggatccaaggtcgttctagaaacctcggttggtca
tatcaggacatcttcagaaaacttcaaatatggaagctcatagtgtcagtttttggattt
tcatctacgccagaacttttatttggaatatatcttctgtactacttccgtgtatttgag
aggcagataggttctaataaatacactgtttttatcatattctccatcgccatctctata
ttgcttgaagtcttcgcgctattactacttaaagatccctccttgaatatactaacttct
ggaccctacagccttatattttcttcgttcgtacccttctattttgatattcccgtttca
acgcggtttcatgtgctaaacctcaaattttctgacaagacttttatatatctagccggt
cttcagctatttttgtcatcttggaaaagatccatggtgccagggatttgtggtatttta
gcggggtccctgtatcgcatgaatattctccgtgtacgcaggatgaagtttcctgaagca
attgcctcattcttctcaagactgtctttcccatcatcgatgggaagtagtacgccggcc
actggatcatctaggaatgttttaggaagcgcaccgacctatcctggtcgccagatggag
gggaactatccagctccgaccctgtcaacattgatggaaccgccagaggactccatagcc
acactggtgtcaatgggctttgacaggaactcagcaaggcaagccctcgtacgtgccaga
aacgacgttaatgctgcaaccaacatcctcctcgagtctcaggggcattaa
DBGET
integrated database retrieval system
