Salvia splendens (scarlet sage): 121799673
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Entry
121799673 CDS
T07627
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121799673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121799673
03016 Transfer RNA biogenesis [BR:
sspl03016
]
121799673
03012 Translation factors [BR:
sspl03012
]
121799673
04131 Membrane trafficking [BR:
sspl04131
]
121799673
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121799673
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121799673
Transfer RNA biogenesis [BR:
sspl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121799673
Translation factors [BR:
sspl03012
]
Eukaryotic type
Elongation factors
121799673
Membrane trafficking [BR:
sspl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
121799673
Exosome [BR:
sspl04147
]
Exosomal proteins
Proteins found in most exosomes
121799673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
FlpD
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
121799673
NCBI-ProteinID:
XP_042055044
LinkDB
All DBs
Position
4:35437633..35440520
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDAVQEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
SELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSQYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPSGAKVTKAAAKKGAK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaagattcatatcagtattgtggtcattggccatgtcgactctgggaag
tcaaccaccaccggacatctcatctacaagcttggtggtattgacaagcgtgtcattgag
aggtttgagaaggaagctgctgagatgaacaagaggtcgttcaagtatgcgtgggttctt
gacaagctcaaggctgagcgtgaacgtggtatcaccattgatatcgccctctggaaattc
gagactaccaagtactactgcaccgtcattgatgctcctggacatcgtgatttcatcaag
aacatgattactgggacgtctcaggctgattgtgctgtactcatcatcgattccaccact
ggtggttttgaggctggtatctccaaggatggacagacccgtgagcatgctcttcttgct
tttactcttggtgtgaagcaaatgatctgttgctgtaacaagatggatgctaccactcct
aaatactccaaggcaaggtatgatgaaatcattaaggaagtctcttcctacctgaagaag
gttggttacaaccctgagaagatcccctttgtgcctatctctggatttgagggtgacaac
atgattgagaggtcgaccaaccttgactggtacaagggcccaactcttctagaggctctt
gatgctgtccaggagcccaagaggccctcagacaagcctctccgtctcccacttcaggat
gtctacaagattggtggtattggaactgtgccagtcggaagagttgagactggtgtcatc
aagcctggtatggtggtcaccttcggaccaactgggctgaccactgaggtcaagtctgtt
gagatgcaccacgaggctctccaggaagctctcccaggtgacaatgttggcttcaacgtc
aagaacgttgctgtcaaggatctcaagcgtggttttgttgcatcaaactccaaggatgac
cctgccaaggaggctgcaaacttcacttcccaggtcatcatcatgaaccaccctggtcag
ataggaaacggttatgctccagtcctcgattgccacacttcacacattgctgtgaagttt
tctgagctcctgaccaagattgacagacgttctggcaaggagcttgagaaggagcctaag
tttttgaagaatggtgatgccggtatggttaagatgattccgaccaagcccatggttgtg
gagacattctcgcagtacccgcctcttggaaggtttgctgttagggacatgcgtcagact
gttgctgttggtgtgatcaagagcgtggagaagaaggacccatcaggagccaaggtgacc
aaggctgcagccaagaagggtgccaagtga
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