Salvia splendens (scarlet sage): 121799765
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Entry
121799765 CDS
T07627
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121799765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121799765
03012 Translation factors [BR:
sspl03012
]
121799765
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
121799765
Translation factors [BR:
sspl03012
]
Eukaryotic type
Release factors
121799765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
121799765
NCBI-ProteinID:
XP_042055161
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Position
4:36592822..36599542
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AA seq
547 aa
AA seq
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MSEAATTHPTQDIADDIKALQLDSAAEDTVMANTEDWKHDIIVNPDTSGAEDTVMANTEA
GKPDTAVNHGKTDVEDAVMATSEDGKHDTHDKTDGGKEKESIPSDDVEDGDEQTKRHLNV
VFIGHVDAGKSTIGGQILYLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKG
KTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERG
GQTREHVQLAKTLGVSKLLVVVNKMDEPTVKWSKERFDEIESKMSQFLKSSGYNVKKDVQ
FLPISGLMGTNMKSRMGKDICPWWNGTCLFEALDAIEIPPRDPQGPFRMPIIDKFKDMGT
VVMGKIESGTVRDGDTMVVMPNKVQVKVLAIFCDENRVRRAGPGENLRVRLSGIEEEDII
GGFVLSSVARPVAAVSEFLAQLSILELLDNAIFCAGYKAVLHIHSVVEECEIVELTQQID
PKTRKRLKKKPLFVKKGAVVECRVQVNNMICMEKYSDFPQLGRFTLRTEGKTVAVGKVTG
LTTSESA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagcggccaccacacatccgacgcaggatatcgcggatgatatcaaggctctg
caactcgattcagctgctgaggatactgtgatggctaacacagaagactggaagcatgat
ataattgtaaatccggataccagcggagcagaggatactgtgatggctaatacagaagcc
gggaagcctgatacagctgtaaatcatggaaagacagatgtagaagatgctgtgatggct
acatcagaagatgggaagcatgatacacatgataaaacagatggaggcaaagagaaggaa
agcattccttcagatgatgtcgaggatggggatgagcagacaaagagacacttgaatgtt
gtattcattggtcatgttgatgctgggaagtccacgattggagggcaaattctttatctt
agtgggcaggttgatgaacgcacaatacaaaagtatgagaaagaagctaaggacaaaagt
agggagagttggtatatggcttatatcatggacacaaatgaagaagagagggttaagggg
aaaactgttgaagtcggaagagctcactttgagactgaaaccacaaggtttacaatattg
gatgccccgggacacaaaagctatgttcctaacatgatcagtggagcatctcaagcagat
ataggtgtactagtgatttcagctcgaaagggagaatttgaaactggttatgagagaggt
ggacagacacgtgaacatgtccaactagcaaaaaccttgggagtttctaagcttcttgtc
gtcgtcaacaaaatggacgagcctactgtgaagtggtcaaaagagagatttgatgagatt
gagtcaaaaatgtctcaatttttgaaatcctcgggttataatgtgaaaaaagatgttcag
tttctcccaatatctggtcttatgggcacaaatatgaagagtagaatgggcaaagatata
tgtccatggtggaatggtacatgcctttttgaagctcttgatgctattgaaattccacca
cgtgatccccaaggccctttcagaatgcctattatcgacaaatttaaggacatgggaact
gttgtcatggggaaaatagaatctggaactgtccgtgatggcgacactatggtagtcatg
cctaataaggtacaagttaaagttcttgccatattctgtgatgaaaatagagtgaggcgt
gctggacctggtgaaaacttgcgtgtcaggttgtcggggattgaagaggaggatattatc
gggggttttgttttaagtagcgttgcaagaccagtagctgctgtatcggagtttcttgcc
caactgtcgattttggagttacttgacaatgcaattttttgtgctggttacaaggctgtt
ctacacatccattctgttgtggaagaatgtgagattgttgagttgacacagcaaattgat
ccaaaaaccagaaaacgtttgaaaaagaaaccactttttgttaaaaaaggtgctgttgtg
gaatgccgcgttcaggtgaacaatatgatttgcatggagaagtactctgactttccacag
cttgggcggtttactctccgcactgaagggaaaacagttgctgtgggaaaagtaactggg
ctgactacaagtgagagcgcctaa
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