Salvia splendens (scarlet sage): 121799786
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Entry
121799786 CDS
T07627
Name
(RefSeq) phytochrome B-like isoform X1
KO
K12121
phytochrome B
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
121799786
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
HATPase_c
GAF
HisKA
PAS_9
PAS_4
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
121799786
NCBI-ProteinID:
XP_042055190
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Position
4:complement(36886384..36892022)
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AA seq
1138 aa
AA seq
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MSTSESKEINRNQSSAAQSSAAGEQRRNSPTNKGKGGDSVSKAMAQYTVDARLHSVFEQS
GESGRSFDYTQSFRTGNQSVSEQQITAYFSKIQRGGHIQPFGCMIAVDERSFRVIAYSAN
ACEMLSLMPQSVPSLEKLETLTIGTDVRSFFTPSSSVLLERAFGAREITLLNPVWIHSKN
SGKPFYAILHRIDVGIVIDLEPARKEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLL
CDTVVECLRELTGFDRVMVYKFHEDEHGEVVAECKRADLDPYLGLHYPSTDIPQASRFLF
KQNRVRLIVDCSAKPVTVIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSVASLTLSVV
INGNDKDGVGGRNTMRLWGLVVGHHSSARYIPFPLRYACEFLMQAFGLQLNMELQLASQF
SEKRVLRTQTLLCDMLLRDSPSGIVTQSPSIMDLVKCDGAALYYQGRYHPLGVTPTEVQI
KDILQWLLASHEGSTGLSTVSLADAGYPGAASLGNAVCGMAVAYITSRDCLFWFRSHTAT
EMKWGGAKHHPQDKDDGLRMHPRSSFNAFLEVVKSRSLPWENGEMDAIHSLQLILRESFQ
DGYGSNSKAVVARQGEDLELQGIEEISSVAREMVRLIETATTPIFAVDCEGRINGWNAKV
AELTGLSVEEAMGKSLVHDLVHEESEEVADKFLFHALRGKEEKNVELKLRTYGTETSKKA
IYLVVNACSSRDYTDKIVGVCFVGQDVTGQKLVVDKFINIQGDYKAIIHNPNTLIPPIFA
SDENTSCYEWNTAMQKLTGWSREDIIGKMLVGEIFGSCCRLKGPDTLTKFMIVLHKALGG
QDTDEFPFSFFDRSGKYVNALLTANKRVNAEDHIVGAVCFLQIASPELEHSIRVQRQKEK
NSVSKMKELAYICQEIRNPLSGIRFANSVLESTNLTEDQKQFLETSAACERQLLKIMKDV
ELEKIEDGSMELEKTEFLLGSVIDAVVSQAMFLLRERGLQLIHDIPEEVKTLGVYGDQFR
IQQIFADFLLNMVRYAPTSKGWIEMQLSPNLKQISESIATVHIEFRITCPGEGLPPELVQ
DMFQNGRWATQEGLGLSMCKKLLKLMNGEVQYIRESDKSFFLIVLDLPMSSRALMCID
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctcagaaagcaaggagattaaccgaaatcagagctccgcagctcaatcctca
gctgcaggagagcagcgccgcaattcccccacgaataagggtaagggcggcgattcagtc
agcaaggctatggcgcagtacaccgtggacgcgaggctgcactcggttttcgagcaatcc
ggtgagtctgggagatcctttgattacactcaaagctttagaaccggcaatcaatccgtc
tccgagcagcagatcacagcttatttctcgaaaattcagcgcggaggtcacattcagccg
tttggctgtatgatagccgtcgatgaacggagttttcgcgtcattgcttactcggcaaat
gcctgcgaaatgctgtccttgatgcctcagtcagttccaagtcttgaaaagctcgaaact
ctgacaattggcactgatgtcaggagcttcttcactccttcgagctcggttctgctcgag
agggcgtttggggcgcgggagatcactttattgaatccagtctggattcattccaagaac
tccgggaagcccttttacgcgattttgcataggatagatgtagggatagtgatagattta
gagcctgctaggaaagaggaccctgctctttccatagctggagctgtacagtctcagaag
cttgctgtgagagccatttcacatttgcagtctctccctggtggggacattaagcttttg
tgtgacacggtagttgagtgtttgagggagctaacggggtttgatcgggttatggtttat
aagtttcatgaggatgagcatggtgaggttgtggcggagtgtaagagagctgatttggat
ccatatcttggattgcattatccctcaacggacattcctcaggcttcgaggtttcttttt
aagcagaatagagttaggttgattgtagattgttcagctaagccggtcacagttattcag
gacgaggcattgatgcagcctttgtgcttggtaggttcaacactgagggcgcctcatggt
tgccatgctcagtacatggcgaatatggggtcggttgcttctttaactttgtccgttgtt
atcaacggaaacgacaaagatggtgttggagggagaaacacaatgaggctatggggattg
gttgttggtcatcactcttctgctcgctatatcccattccctcttcgttatgcttgtgag
ttcctaatgcaggctttcggacttcaactgaacatggagctacagttggcatcacagttt
tcggagaagcgtgttttaaggacgcagactttgttgtgtgatatgctgcttcgagattct
cctagtgggattgttacacagagccctagcattatggatctcgtgaaatgtgatggggca
gctctttactaccaagggaggtatcaccctttgggagtcacacctactgaggtgcagatt
aaggatattctgcaatggttgctggcgtctcacgagggttcgactggtttgagcacggtt
agtttagctgatgcagggtatcctggggctgcctctttaggcaatgctgtgtgtggaatg
gctgttgcatatatcacttcacgggattgcttgttctggtttcgttcccatactgcgacg
gagatgaaatggggcggagcaaagcatcatccgcaggataaagatgacggcttgagaatg
catcctcgctcctcattcaatgcgtttctagaagttgttaagagccggagtcttccatgg
gagaatggggagatggatgcaattcactctctccaactaattttgagagagtcatttcaa
gatggctacggaagcaattctaaggcggttgtagcgagacagggagaggacttggagtta
caagggattgaggagattagttctgtagccagggaaatggttaggttgatagagactgca
acgactcctatatttgccgttgactgtgaaggccgcataaatgggtggaatgcaaaagtt
gctgagttaaccggactatccgttgaggaagcaatggggaagtccttggttcacgatctt
gttcatgaagaatccgaagaagtggctgacaaatttctgtttcatgctcttagaggcaag
gaagaaaagaatgtagaattaaagttgaggacatatggtactgaaacaagcaagaaggct
atatatttggtggtcaatgcttgttctagcagggattatacagacaagatagttggtgtg
tgctttgttggtcaggatgtcacgggtcagaaactggtggtcgataagtttatcaatatt
caaggcgattacaaggcaattatacacaacccgaacactctaattccacctatatttgct
tcggatgagaacacatcttgctatgagtggaacaccgctatgcagaagctgaccgggtgg
agtagggaggacatcattggaaagatgttggtcggggagatatttgggagttgttgtcgg
ctcaagggaccggatacgttgacaaaattcatgattgtcttgcacaaagcactcggaggt
caggatacggacgagttcccgttttccttttttgaccgaagtggtaagtatgtaaatgct
ctgttgactgccaacaagagggtgaatgcagaggaccatattgtcggagccgtttgtttc
ttgcagattgcaagtcccgagctggaacattccatcagagtccagaggcaaaaggaaaag
aacagtgtttcaaagatgaaagagctcgcttacatttgtcaggaaattagaaatccatta
agtggtatacgttttgctaattcggttctggaaagcacgaatttgacagaagaccagaaa
cagtttcttgagaccagtgctgcgtgtgagaggcagttattaaagattatgaaggatgtt
gaacttgaaaaaattgaggatggttcaatggagctcgagaaaactgagtttctacttggg
agtgtaatcgatgctgttgttagccaagcaatgtttttgcttagagaaagaggtctgcag
ttgatccacgatataccagaggaagtcaagacactcggagtgtatggtgatcaatttaga
attcaacaaatctttgctgatttcttactgaacatggtacggtatgcaccaacctcaaaa
ggttggatagaaatgcaactcagtccaaacttgaagcaaatttctgaatcaattgccact
gtgcacattgaatttaggataacgtgccctggcgaaggtcttcctcctgaactcgtccaa
gacatgttccaaaacgggcgatgggcaactcaggaaggcctaggattgagcatgtgcaag
aaactcttgaagcttatgaatggagaagttcaatatatcagagaatcagacaaatctttt
tttctcatcgtactcgatcttcctatgtccagcagggccttaatgtgtatcgactga
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