Salvia splendens (scarlet sage): 121799820
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Entry
121799820 CDS
T07627
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121799820
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sspl01002
]
121799820
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121799820
04121 Ubiquitin system [BR:
sspl04121
]
121799820
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121799820
Peptidases and inhibitors [BR:
sspl01002
]
Metallo peptidases
Family M67
121799820
Membrane trafficking [BR:
sspl04131
]
Endosome - Lysosome transport
Others
Others
121799820
Ubiquitin system [BR:
sspl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
121799820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
121799820
NCBI-ProteinID:
XP_042055245
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All DBs
Position
4:37216654..37221601
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AA seq
511 aa
AA seq
DB search
MRRPSYSTSPINFSAMTRKVDVDNRIPLRNYYRIADNILKQANIYREEKNLIDLYVILLR
YSSLVSETIPYHKDYQVLCSKERTFYKKKLLAVLDELEALKPKVRLQLDEQKTFSTNSQM
HQLDGPTSVSYTPSVNNNASLNYSSKQMSQQITVLSSSLKQNNDYARYSSSKPVESQFQK
MSLGLPLPKQETLSRHSLLGPTGLRGQWLGPRAEVKVNYPTNIVVDAKEFSSLNQVGQQE
LVAANDGDSNAEKSTIESVLSLDDGRWLAEESGPLQGNVENNDFQLGNIRQPSPPPVLAQ
VMPEHRHISPSRVADPRPGPANFSQDGLPSSNSYQDLHIPVKILDDFLRLARENTTRNLE
TCGVLAGSLKNRVFHITTLIVPKQESTSDSCQTLNEEEIFDVQDKRSLFPLGWIHTHPTQ
TCFMSSVDLHTHYSYQVMLPEAIAIVMAPTDTQSPHGIFHLSDPGGVSVIQNCQQRGFHP
HEEAEDGSPIYEHCSHVYMNAKLKFDVVDLR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggccgtcgtactccacttccccgatcaatttcagcgctatgacgcggaaggtc
gacgtcgacaatcggatccctctccgcaattactatcgtatcgccgataatatcctcaaa
caggcaaatatctatagggaggaaaaaaacttgatcgacctgtatgttatactgctaaga
tattcaagtttggtgtcagagactataccataccataaagattaccaagttttgtgttcc
aaagaaagaactttctataagaagaaattgcttgccgtgctagatgagctggaggcttta
aagccgaaagtgcgtcttcagttagatgaacagaaaacatttagcactaatagtcagatg
catcagcttgatggtccaactagtgtttcttacacgccttcagtaaataacaacgcctcc
ttaaactacagtagcaagcagatgtcacaacagattactgtgctttcatcttcattgaag
cagaataatgattatgctagatattcttcatcaaaacctgttgagtctcaattccagaag
atgtctcttggtttacctcttccaaagcaggaaacattatccaggcattcattattagga
ccaactggtctacgtggtcagtggcttggtccaagggctgaggttaaggttaattatccc
actaatattgttgtggatgctaaagaattctcaagtctgaatcaggttgggcaacaagaa
ctagtggcagcaaatgatggtgattcaaatgcggaaaagtcaacaatagaatctgtgcta
tctttggatgatggcagatggcttgccgaggaatctggtcctctccaagggaacgtggag
aacaatgattttcagttgggaaatatcaggcaaccttctccacctcctgtcctagcacaa
gtgatgcccgaacatcgtcacatatctccatcaagagttgcagacccaagaccaggacca
gcaaatttctctcaggatggcttgcctagttccaattcttaccaagatcttcacattcca
gtgaagatacttgatgatttcttgcgattggctcgagaaaatactacaaggaatttggag
acatgtggtgttcttgctggttcacttaagaatagagtatttcatattacgacgctcatt
gtcccaaagcaggaatcgacttcagactcgtgtcaaactttgaatgaagaagagattttt
gatgttcaagacaaacgctccctttttcctcttggatggattcacacacatccaacacaa
acgtgctttatgtcttccgttgatcttcacactcattattcatatcaggtcatgttgccg
gaagcaattgcaattgttatggctcctacagacacacaaagccctcatggcatattccat
ctctccgaccctggtggtgtctctgtgattcaaaactgccaacagcgtgggttccatcct
catgaagaggctgaagatggaagccccatctacgagcattgctcccatgtttatatgaat
gccaagttgaagtttgacgtggtcgatcttcgttga
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