Salvia splendens (scarlet sage): 121799880
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Entry
121799880 CDS
T07627
Name
(RefSeq) ABC transporter B family member 2-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121799880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sspl02000
]
121799880
04147 Exosome [BR:
sspl04147
]
121799880
04090 CD molecules [BR:
sspl04090
]
121799880
Enzymes [BR:
sspl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
121799880
Transporters [BR:
sspl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
121799880
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121799880
CD molecules [BR:
sspl04090
]
Proteins
121799880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
AAA_29
AAA_22
AAA_16
AAA_21
RsgA_GTPase
AAA_15
DUF87
nSTAND1
APS_kinase
DUF815
Motif
Other DBs
NCBI-GeneID:
121799880
NCBI-ProteinID:
XP_042055327
LinkDB
All DBs
Position
4:38142635..38154810
Genome browser
AA seq
1266 aa
AA seq
DB search
MSHQSATGAASNFSVGGEDEDDEKKKKKKKKKSGSKKTVGIAQMFSFADSYDYLLMFVGS
IGACVHGASVPVFFIYFGKMINIIGLAYFFPKEASHKVAMYSLDFLYLSIAILFSSWTEV
ACWMHSGERQAAKMRMAYLRSMLNQDISIFDTEASTGEVISAITSDILLVQDAISEKVGK
FLHYVSRFIVGFAVGFMRVWQISLVTLSIVPLIAIAGGIYAYVATGLIASVRKSYIEAGE
IAEEVIGNVRTVQAFVGEEKAVKSYTESLLGTYKYGRKAGLAKGLGLGTLHCVLFLSWAL
LVWYTSIVVHKNIANGGESFTTMLNVVISGLSLGQAAPDITAFIRAKAAAYPIFEMIERN
KTSKSNATRHGKKPNKVEGHIKFKNVMFSYPSRPDVVIFNKLSLDIPPGKIVALVGGSGS
GKSTVISLIERFYDPLSGHVMLDGNDVRELDLKWLRQQIGLVNQEPALFATTIRDNILYG
KNDATNEEITRAAKLSEAINFISNLPDRFETQVGERGVQLSGGQKQRIAISRAIVKNPSI
LLLDEATSALDAESEKSVQEALDRVMVGRTTVIVAHRLSTIRNADVIAVVQNGAIVETGS
HEDLMSRPNSAYASLVQLQEAASSTLARLPSHSSRPLSIRYSREGSIRFSRELSRTTRSL
GASFRSEKSLSRFGGDGGDNVVKLAKVSSKRLYAMVRPDWFYGISGTICAFIAGAQFPLF
ALGVTQALVSYYTDWDTTRREVKKIAFLFTGGAVVTVIVHAITHLSFGIMGERLTLRVRE
KMFTAMLRNEIGWFDDVNNTSAMLASRLESEATLLKTVVVDHSTILLQNVGLVVTSFVIS
FMLNWRLTLIVIATYPLIISGHISEKLFMKGYGVDLNKAYLKANMLAGEAVSNIRTVAAF
CSEEKVVSLYARELVEPSRSSFRRGQAAGIFYGVSQFFIFSSYGLALWYGSTLMEKGLSG
FKSVMKTFMVLIVTALAMGETLAMAPDLLKGNRMVASVFEVLDRRTEIVNDVGEEVARVE
GSIELKDVEFSYPSRPNVMIFKDFSLRVHSGRSMALVGQSGSGKSSVIALILRFYDPTSG
KVLVDGKDIKRLKLKSLRKHIGLVQQEPALFATSIYENILYGKEGATEGEIMEAAKLANA
HSFISGLPEGYSTRVGERGVQLSGGQKQRVAIARAILKNPSILLLDEATSALDVESERIV
QQALDRLMKNRTTVVVAHRLSTIKNADQISVLQDGKIIEQGTHSGLVENKDGAYYKLINL
QRQQQH
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcagtctgccacaggagcggcttctaatttctcggtgggtggcgaggatgaa
gacgacgagaagaagaagaagaagaagaagaagaaatcggggagtaagaaaactgttggc
atcgcgcaaatgttttcgtttgcggatagctatgattatttattgatgttcgttggatcg
atcggcgcgtgtgtgcatggtgcttccgtcccagttttcttcatttactttgggaaaatg
attaatataattggcttagcatattttttccctaaagaagcctctcacaaagttgctatg
tattcattggactttctgtatctcagcattgccattctgttttcttcatggacagaggtg
gcgtgttggatgcattctggggagaggcaagcggcgaagatgagaatggcttatctccga
tcaatgctaaatcaagatattagcattttcgacactgaagcctccaccggtgaagtgatt
tctgctattacttccgatattctcctggttcaggatgccatttccgaaaaggtggggaag
tttttgcactacgtgagtcgtttcatagtagggttcgccgttggtttcatgagagtttgg
cagatcagtttggtgacactttccatagtgccattaatcgcaatcgccggtgggatttac
gcgtacgtggcgaccggcctcattgccagtgttcggaaatcttacatcgaagctggagaa
atcgcggaagaggtgataggcaacgtgaggacggtgcaagcatttgtgggagaagagaag
gcagtgaagtcatacacggagtcccttttggggacatacaagtatgggaggaaagccggg
cttgccaagggcctcggccttgggacgctccactgcgtcctcttcctctcgtgggcgttg
ctcgtctggtacaccagcatcgtcgttcataagaacatcgccaacggtggagagtccttc
accaccatgctcaatgttgtcatctctggcttgtcgctcggacaggcagcgccggacatc
acggccttcatacgggccaaggcagccgcgtaccccatcttcgagatgatcgagcggaac
aagacgagcaagagcaacgccacaagacacgggaagaaaccaaacaaagtggaaggccac
attaagttcaagaacgtgatgttcagctacccttcccgccccgacgtcgtcatcttcaac
aagctctccctcgacatccctcccgggaaaatcgtggccctcgtcggcggcagcggctcc
gggaagagcaccgtcatatccttgatagagcgcttctacgacccgttgtccggacacgtc
atgctcgatgggaacgatgtaagagagcttgacctcaaatggctcagacagcagattggt
ttggtgaaccaagagcctgccctgtttgccaccaccataagagacaacattctctatggg
aaaaatgatgcaaccaatgaggagatcacacgtgctgcgaagctctctgaggctatcaac
ttcataagcaaccttcctgatagatttgagactcaggtgggggagagaggtgtgcagctg
tctggtggccagaagcagaggattgccatatctcgtgcgattgtgaagaacccttcgatc
ttgctgctggatgaggctacgagcgccctggatgctgagtcggagaagagtgtgcaggag
gctctcgaccgtgtgatggtcggacgaacgactgtgatcgttgcgcataggctttctact
attaggaacgcggatgtgattgctgttgtgcagaatggggccattgtggagactgggagc
catgaggatcttatgtcgaggccgaatagcgcttatgcttcgcttgtgcagctgcaggag
gccgcctcgtccaccttggctcgcttgccctctcacagcagccgccctctcagcattagg
tattcgcgggaagggagcataaggttttcgagggagctatcgcgtacaacaagaagcctg
ggagcaagttttcgatctgagaagtctctaagcagatttggcggtgatggaggtgacaat
gttgtgaagctggccaaggtgtcttcgaagaggctgtacgccatggtgcggccagactgg
ttttatggcatttccggcaccatctgcgcattcattgctggggcgcagtttcctcttttc
gcgcttggtgtcactcaagctcttgtgtcttactacacggattgggacacgacgcgtcgg
gaggtcaagaagatcgccttcctctttactggaggtgctgtcgtgactgtgatcgtccac
gccatcacgcatctcagcttcgggatcatgggagaacgcctcacacttcgtgttcgagag
aagatgttcactgctatgttgaggaacgagatcggatggtttgatgatgtgaacaacacg
agcgccatgctagcatcgaggctggagagtgaagcgacgctgttgaagacagtggtcgtt
gatcactcgactattctgttgcagaatgtaggccttgttgtgacttcatttgtcatctcc
ttcatgttgaactggaggcttactcttattgtcattgcaacatatcctttgataatcagt
ggccatattagtgagaaactgttcatgaaaggctatggtgtggacttgaacaaagcgtat
ctcaaagcgaacatgcttgctggagaggctgtgagcaacatccgtacagtcgcagcattc
tgctcggaggagaaagttgttagtctctatgcacgcgagctagttgagccatcaaggagc
tcattcaggcgtggccaagctgccgggatcttctatggagtctcacagtttttcatcttc
tcatcctacggtcttgctttatggtatggttctactctcatggagaaggggctttccggg
tttaagtcagtgatgaagacattcatggtgctgattgtgacggccttagctatgggagag
acgctagccatggcaccggaccttctcaagggaaacagaatggtggcgtccgtgtttgaa
gtgctggaccggaggactgagattgtgaacgacgttggagaagaggttgcgcgggtagaa
ggctcaatagagctcaaggacgtcgagtttagctacccatcaaggccaaacgtgatgatt
ttcaaggacttcagcttgagagttcactctggaagaagtatggcactagttggccagagt
ggatcaggcaaaagctctgtaattgcactaatcctcagattctatgatcccacttctggg
aaagtgttggtggatggtaaggacataaagaggcttaagctcaagtcactaaggaaacac
atagggttggtgcagcaagaaccagctctgtttgccacatccatctatgagaacatccta
tatggcaaagagggagccacagagggtgaaataatggaagccgcgaagcttgcaaacgca
catagcttcatcagcgggctcccagaagggtactcaacccgggtgggggaacgaggagtt
cagctctccggagggcagaagcaaagagtggcaatagcgagggcaattctaaagaaccct
tcgatcctgctcttggatgaagcgactagcgctttggatgtggagtcagagcgcattgtg
cagcaagcactcgacaggcttatgaagaaccggacaacagtggtggtggcgcacaggctg
tcgaccatcaagaatgcagatcaaatatcagtgttgcaagatggcaagattatagagcaa
gggactcattcaggtctcgtagagaacaaagatggtgcctattacaagttgataaaccta
cagaggcaacagcaacactaa
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integrated database retrieval system
