KEGG   Salvia splendens (scarlet sage): 121799943
Entry
121799943         CDS       T07627                                 
Name
(RefSeq) SART-1 family protein DOT2-like isoform X1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121799943
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sspl03041]
    121799943
   04121 Ubiquitin system [BR:sspl04121]
    121799943
Spliceosome [BR:sspl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    121799943
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    121799943
Ubiquitin system [BR:sspl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121799943
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 121799943
NCBI-ProteinID: XP_042055402
LinkDB
Position
4:38831194..38848024
AA seq 942 aa
MGADLADPTHRRSVERRDGGDNMRERWTGDYGGMGENESDDALESGKNRGKEKSKSSSRR
EEKDHRSRDRERSKVLDNIKENKDSEKDRSSTRDRRKEDRDEREKDKIRDKGQEQDSERD
KHKEKERDKERRDRIKEKEREREREKEAEKDADRGRDKEKVKEKSRDKDRDKEKEKDRSK
DKEREKHKDRDREREFARHRGKDTAEREKGKERDREKEKLAEQEKDRASDRDKSSRKQKD
ESKDGHSRFENDYSNNQTSKHQVDNSDAKSGSKSLDQTEKADNRESTSKLEQRISKMKEE
RLMKKSEGAPDILSWVNKSRKIEEKRNAEKEKALQLSRIFEEQDNMNDEGSDDESGTQDI
TQHLGGVKVLHGLDKVLEGGAVVLTLKDQSILADGDINEEVDMLENVEIGEQKRRDEAYR
DSKKKVGVYDDKFNDEVGVEKKMLPQYDDPIADEGLTLDSSGRFSGEAERKLEELRRRIQ
GVSASNHDEDLNSIGKTSTDYYTQEEMAKFKKPKKKKSLRKKDKLDINALEAEAIASGLG
VEDLGSRRDGRRQIRKEEEDRIEAETRSNAYQSALAKADEASKYLRQEQGRTMQSEEEDA
PAFGDDDDELRKSLERARRIALQKQNGTEKSGSMVIKLLASRDANESASDNPNESSGDQP
ENKVVFTEMDEFVWSLQLDEEEKKPGSEDAVFMEEDVAPSTSDHEMMDEDGGLTDVQEPT
PDETHTEEKEEEVAPDETIHEQAVGKGLGGALQLLKDRGTLKETIEWGGRNMDKKKSKLV
GIVGGDGTKEIRIERTDEYGRILTPKEAFRLLSHKFHGKGPGKMKQEKRMRQYQEELKIK
QMKNADTPSLSVSRMREAQAKLKAPYLVLSGNVKPGQSSDPRSGFATVETDLGGGLTPML
GDKKVEHFLNIKRKPERGDTPSPKKPKRLNLSVLFPGKRGSL
NT seq 2829 nt   +upstreamnt  +downstreamnt
atgggggctgatttagctgatcccacgcaccgcagaagtgttgaaagacgtgatggagga
gacaatatgagggagagatggacaggagactatggtggcatgggggaaaatgaatctgac
gacgcactagagtctggcaagaaccgtggcaaagagaagagcaaaagcagtagccgtagg
gaggagaaagatcacaggagtagggatcgagaaaggtcaaaggtcctggacaatatcaag
gaaaataaagattctgagaaagatcgatcatccactagggataggaggaaagaggacagg
gatgagagggagaaggataaaattcgtgataagggccaagagcaggattctgagcgagac
aagcacaaagaaaaagagagagacaaagagcgaagagaccgtataaaggaaaaggaacgg
gaacgtgaaagggaaaaggaagcggagaaggatgctgacagaggacgggataaagaaaaa
gtaaaagagaagagccgagataaggatagagacaaggagaaggaaaaagatagatcaaag
gacaaggagcgagaaaagcacaaagatagggatagggaaagggaatttgctagacataga
ggtaaagatacagctgagagagagaaggggaaggagagagacagagagaaggaaaagctg
gcagaacaagagaaggatagggcaagtgacagagataaaagtagtcgaaaacagaaggac
gagagcaaggatggtcattctagatttgagaatgattatagtaacaatcaaactagtaag
caccaagttgataactctgatgccaagagtggctccaaaagtcttgaccaaactgagaag
gctgataatcgtgaatcaacatctaagttagagcagcgtatttctaaaatgaaagaagaa
aggttgatgaagaagtctgaaggtgctcctgatattttatcttgggttaataagagcagg
aagattgaagagaaaaggaatgctgagaaggagaaagcattgcagctttcgagaattttt
gaggagcaggataatatgaatgatgaaggaagtgatgatgaatcaggaactcaagacata
acacaacacttgggtggagtcaaagttctccatggactggacaaagtacttgaaggcggt
gcagttgtgctaactcttaaagatcaaagcatacttgctgatggagacatcaatgaagag
gttgatatgcttgaaaatgtggagattggagagcaaaagcgaagagacgaggcttataga
gattcaaagaagaaagttggtgtttatgatgacaagttcaatgatgaagtgggtgtagag
aaaaaaatgcttccacaatatgatgatcctattgctgatgaggggttaactcttgattcg
agtggaaggttttctggtgaagctgaaaggaaattggaagagctccgaagaagaattcaa
ggagtgtctgcaagcaatcatgatgaagatctcaattcaattgggaagacatcaacagat
tattatacccaagaagaaatggccaaatttaagaagccaaagaaaaagaagtctttgagg
aagaaggataagctggacataaatgcccttgaagctgaggctatagcgtccggactgggt
gttgaggatcttggttctaggagagatgggagacgacagattcgtaaggaggaagaggat
agaattgaggccgaaacgaggagcaatgcttaccaatcagcattagctaaagcagatgag
gcatctaagtatctccggcaagagcaagggcgtaccatgcagagtgaggaagaagatgca
cctgcttttggtgatgatgatgatgaactccggaaatcattggaaagagcgagaagaata
gctttgcaaaaacaaaatggaacagaaaaatctggctccatggtgataaagctcctagcc
tctcgtgatgccaatgagtcagcttctgacaatccaaatgaaagttctggggatcaacca
gagaataaggttgtcttcacagagatggacgagtttgtttggagcctacaacttgatgaa
gaagagaaaaaacctggaagtgaagatgccgtcttcatggaggaagatgtggcaccgagc
acatctgatcatgaaatgatggatgaagatggtggcttgactgatgtacaagagcccact
ccagatgagacccacacagaggaaaaagaagaggaggtggctccagacgagacaattcat
gaacaggcagttggtaagggtctaggaggtgcgcttcaacttttgaaagatcgtgggact
ctcaaggaaaccattgaatggggtgggcgaaacatggataagaagaaaagcaaacttgtt
ggcatagtaggtggagatggaactaaggaaatacgtattgagcggacagatgaatatggc
cggattttgacaccaaaagaagcttttcgtctactctcgcacaagttccacggcaaaggc
cctggaaagatgaaacaagaaaagcggatgcggcagtatcaggaagagttgaaaataaag
cagatgaaaaatgctgatacaccatcactttcagtttcaagaatgagggaagctcaagct
aagcttaaagctccttatctggtcttaagcggaaatgtcaaaccagggcaaagtagcgat
ccacggagtggttttgcaactgtagagacagacctgggtgggggcttgacacccatgctt
ggtgataaaaaggttgaacacttcttgaatatcaaacgcaagcctgagcgtggagacaca
ccttctccaaagaagcccaaaaggttgaaccttagtgtactctttcctggtaaacgaggc
agcctctga

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