Salvia splendens (scarlet sage): 121800089
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Entry
121800089 CDS
T07627
Name
(RefSeq) DNA topoisomerase 1 alpha-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121800089
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
121800089
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Topoisomerases
121800089
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
121800089
NCBI-ProteinID:
XP_042055582
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Position
4:complement(40527450..40535192)
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AA seq
892 aa
AA seq
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MAVEACNKQKVMADDMDDDDVPLVFKRSSSSSKPNQSNSEIKKSIPQKHDQQLGRSPASY
ARPQNGQNNFVQRSKMVPSSRTPPDRSPLMSPKLSNSPTKGLALKPTIVDFKPSTSKAGE
LNSEKRQIKGENSLNESTSRPKEESEDSEDDKPLSARLHAGRSKFNSGNANKGANVSNFG
QTSKIPKSEDSDDEIPLSSKFRVKAVAGGSTNRFSTSDKKPLLAECGQNGSASTDRKPSA
VLKKRNVDSEKPTDSSLKRPKLSETSTLHKNKESSVKAEMEEEDEEDHIPISQRIKKTAV
AEKKSAQVKKFTKPTTPISKFNQKPKKFIKNSKYSESSKVHPSSGDGQKWTTLVHNGVIF
PPPYKPHGVKMLYKGKPVDLTSEQEEVATMFAVMLGTEYMDKPKFKENFMDDWRKILGKN
HIIQSLEHCDFTPIYDWHLSEKEKKKQMTTEEKKALKEEKLQQEEKYMWAILDGVKEKVG
NFRVEPPGLFRGRGEHPKMGKLKRRIQPSDITINIGKDAPIPECPIPGQSWKEIRHDNTV
TWLAFWNDPINPKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRAAYTKDFTSKD
PTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSI
RYQNEVEVEVAVFRAIQEFRNKKKGGDDIFDKLDTSKLNAHLKELMPGLTAKVFRTYNAS
ITLDDMLSKETKGGEVAEKIVVYNHANKEVAIICNHQRTVSKSHSAQMTRLNEKIDELKN
VLEELRTDLARAKKGKPPLKGSDGKTKRNLNPDALEKKISQTLAKIEKMERDKDTKEDLK
TVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVEPSFRF
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgaggcatgtaacaagcaaaaggtaatggcggatgatatggatgacgatgat
gtaccgttagttttcaagaggagtagctcttcttcaaagccaaaccaatcaaactcggaa
attaaaaaatcaatacctcagaaacatgatcaacagctagggaggtcgcctgcatcatat
gcacgcccacaaaatggtcagaataactttgttcaaaggagtaagatggtcccttcttcc
aggacacctcctgatagatctcctctgatgagcccaaaattatctaattctcctaccaag
ggattggcattaaagcctacaatcgtggattttaaaccttccacttcaaaggccggtgag
ttaaactccgaaaagcgtcagattaaaggtgagaattctttgaatgaatccactagtaga
ccaaaggaggaatcagaagattctgaagatgataaaccacttagtgccaggcttcatgct
gggcgatcaaagttcaactctggaaatgccaacaaaggtgccaatgtttcaaattttggt
caaacttcaaagatccccaaatcagaagattcagatgatgaaatacctttgtcttctaag
tttcgagtgaaggctgttgctgggggttcaaccaacaggttttctactagtgataaaaaa
cctttgttggccgaatgtggacaaaatggttcagcatcaacggataggaaaccttccgct
gttttgaagaagagaaatgtagatagtgaaaaacctacggattcatctttaaaaaggcct
aaactaagtgagacatctacacttcataaaaataaagaatcgtccgttaaagctgaaatg
gaggaagaagatgaggaagatcatattcccatatcacagagaataaagaagacagctgtt
gcggagaagaaatcagcacaagtcaaaaaatttactaaacctacaactccaatatcaaag
tttaatcaaaaaccaaaaaagttcattaaaaactcaaagtattctgagtcatcaaaggtt
catcctagttctggtgatgggcagaagtggaccactttggtccataatggtgtgattttt
ccgccaccatacaagcctcatggtgtcaagatgctctataaagggaagcctgttgactta
acttcagaacaggaagaggtggcaacaatgtttgcggtgatgcttggtactgagtatatg
gataagcctaagttcaaagagaacttcatggatgactggcggaagattttggggaaaaat
cacattattcagagcttagaacactgtgatttcactccaatatatgattggcatctgagt
gaaaaggagaaaaagaaacagatgacaacggaggagaagaaagctttgaaggaggagaaa
cttcagcaagaggaaaaatatatgtgggccattcttgatggtgtgaaagagaaggttgga
aactttagagttgaaccacctggattgttccgcggccggggtgagcacccaaagatgggg
aagctgaaaagacgaattcaaccaagtgacataactatcaatattggaaaggatgctcca
attcctgagtgccctatccctggacaaagctggaaagagataaggcatgacaacacagtg
acatggttggccttttggaatgaccccattaatccgaaggaattcaaatatgtttttctt
gccgcaagtagtaccttgaaaggacaaagtgacaaagagaagtacgagaaggccaggcta
ttaaaggactatatacaaggtatccgagcagcatataccaaagactttacaagcaaagac
cctactaagaagcagatagcagtagctacgtatcttattgacaaactagctcttagggca
ggcaatgagaaggatgatgatgaagctgatacagtaggttgctgtacgttaaaagttgaa
aatgtggaaccagtgcctccaaatatcttgaagtttgatttccttggtaaagattctata
aggtatcagaatgaagtcgaggttgaagttgctgttttcagggcaatccaagagtttcga
aataagaaaaaaggcggagatgatatatttgacaaacttgatactagtaaactgaatgct
catctaaaggaattgatgcctggtctcactgctaaggtcttccgtacatacaatgcatct
attacattggatgacatgttgagcaaggaaacaaaaggtggagaagttgccgagaaaatt
gttgtttataaccacgcaaacaaggaggttgccatcatttgtaatcatcaacggactgtc
tcgaagtcccacagcgcacagatgactcgcttgaatgaaaagatagacgaactaaagaac
gttttggaagaattgaggacagatttggctagggccaaaaaggggaagccccccttgaag
ggttctgatgggaagacgaagaggaatctaaatcctgatgcattggagaaaaagatatct
caaacattagcaaagattgaaaaaatggaaagagataaggatacgaaagaggatctaaag
actgtagcattgggaacgtcaaagatcaactatcttgatcctaggatcactgttgcatgg
tgcaaacgccacgaagttcctatcgagaagatatttaacaagtctctactggcgaaattc
gcgtgggcaatggacgtcgagccaagtttcagattctaa
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